CI01000010_03992093_03992619


Basic Information

Item Value
gene id CI01000010_03992093_03992619
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3991101 ~ 3993606 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_03992093_03992619.mRNA
ATATTTCACTGCATATGCAACAAATCAAAATGTGAAGGTTGCCTAAACCAGGGGTTTTCTATCCTGAGTGCTGCATTGCATATTTTGTATGTTTTCCTTATTAAACGCTTGATTCAGATCAGGCATTAAAGGCATAGTTCACCCAAAAATGAAAATTCTGTCATCATTTACTCACCCCCAGGTTGCTATAAATTTCTTTACAGGTTGTATAAATTTCTTTGTTCTGTTGAACACAAAGGACGATATTTTAAAGAATGTGGGAAACTGAACAGTTCTGGGGCACCATTGACTTCCATGGTAAAAAAAAGTTTCCCACATTCTTCAAAATATCTTATAATAAGCCTGTTTACAAACTTTCTTCAAAATACATTCCTTTGTGTTCAACAGAACAAAGAAATTTATACAGGTTCGGAACAACTTCAGGGTGAGTAAATTATGACAGAATTTTCATTTTTGGGTGAACTATCACTTTAAGGCATGTTCATCAATTTACATTGGCATTAATAACAACACATTACTGCCATCAGGTGGTGAAATGCAAACGTTGGCACTTGGCATCCTCAGTAATTTAATAACATGCATTTCCACAGCTTGTGGTTAATATTCATTTTTTCAGTTTTATTTCATTTATTTCATTTTTGAAAGATCTGATATGTTAAAATTATGTATTACTTAATCCAATCAAATCAAAGTTAGTCGTTTGTTTACATATATTTTGGATCTTAAATAGGGTAAATGTAGTAGTCTTTTAAGATGAAACAATGCAACCAAACCAAAAACATTTGAGACGTCTAACCTTTGTTACTACATGATTTATATCTAGTTACATGGCCGCCAATCATTGTGGTTGCCACAAGGCCATACTGTACATAAATGCTTACAGAACAATTTCTTATTGTGTCGAGCAGCACAGGAGAATTTCAAAACACTGGCACATTGTTTTCTGCTGATTTACTTCGTTCTCAAGTGTTTTTCTGTGCCTTCCCAATGTCTCCTATTTTCCCACCAGTATTACGATATGTCCCACCTCCTGAGTGTCCCACTGCTGATGGCGCTGTAAACACAGTGACGCGGCCGTTGCGTGGCCCATGCAAATCACAGATTGGTGTTGTATATGTGGACGAGTGCGAGAGACGCTATATTCACGTCCACAGCTTCATATGCAATCACATAAACAAAAGACACGCGAGGACTGCTCGTCGGAGGTGCAATGGCAAGGAAAAGTGCAATTCCTCCTTCATACTATGTTCATATTTTAAGAACCTCTATCCAGAACAAAAGGTCCACTGATATGTTTTCATCCTGATAGTTACTTTGTTGTTGCAAAACGGGAAGATGTGCAGACAAAACATAGGTTCGAATTCTGAATTCGGAAAGGATTTAATTGTTACGTTATAGAAGTGAACTGGAAAGCAAGAATTGGGATAATGGAAAACATATATGATGTTTACTGAGATTTTTGTGTGTGTTTTTGTGCTGTGCAAGTCCTCATATTACGTGTGGTACTCTTATAGCTTAGTATACAACCAGTCAATGTGGAGTAAAACAACGTGATATATGGGTCAAAACACAAACAAGCCGAGACCTTGTATATATTGCAAATCATGGGAGTTGAACACATAAATAAATTAATGGCACTCTTAAGAAATATGATCAAATTATCCTACGCTCACATGAAATGAAGATAATAACGGTGACTATTTTAGCATCCACACCAACAGACGATAACGTTCTGTTTATTATAAAGTCTGTTGGATTCTGATTAGCCGTCAATGTTTTTATCTTAAAAAATCATTCTGAAAGTGATTCCAATGATATTGTTCCGTGTCGTTATTGTTATAGCTGTGTTGGAACTTCCCTATTCTCATAGAATTAGAACGATTATTAAAACTTTATAGTCATAGTTATCGTCCTTGGTGTGAACAGCCCTTTATACATCTGTTTTATTCTACATGGAGTGGGTCGCCCCCTAATGATCGCCGCCATGTTGCCATCACATGACCAGTTGTTCTGCTGCTTTAAAAACTTTAGCTCTTTAAAGTCGGCTGGATTCTGATTGTCTGTCACAATTTTTTTACCGTTCATGAGCTAAAAAAAAAACGTCCTGAAAGTGATTCTAATGATATTGTTCCTCTTTGTCATTAACGTTTTATGATGTGATTAAATTGCTGGAGTTGCTGTTTGTAGTCTGCACATCATTTTTTTAGTCTGAATCCAAGAGTGTGTTATACACACATATATGAATGTGTTTATTATGAGACAGAGAAAAACAGATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_03992093_03992619.mRNA True 2282 mRNA 0.36 3 3991101 3993606

Neighbor

gene id symbol gene type direction distance location
CI01000010_03961520_03974921 SLC44A5B, SLC44A5, SLC44A5A coding downstream 16180 3961419 ~ 3974921 (-)
CI01000010_03941555_03947042 NA coding downstream 44059 3941555 ~ 3947042 (-)
CI01000010_03914320_03915250 LRRIQ3 coding downstream 75851 3914252 ~ 3915250 (-)
CI01000010_03912179_03913373 NA coding downstream 77728 3911683 ~ 3913373 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 coding downstream 92043 3890069 ~ 3899058 (-)
CI01000010_04028461_04031710 NA coding upstream 34691 4028297 ~ 4031710 (-)
CI01000010_04153653_04157398 NA coding upstream 158274 4151880 ~ 4158138 (-)
CI01000010_04311215_04316218 NA coding upstream 317128 4310734 ~ 4316671 (-)
CI01000010_04356379_04367982 NA coding upstream 362731 4356337 ~ 4368250 (-)
CI01000010_04374856_04376532 CENPH coding upstream 380902 4374508 ~ 4376946 (-)
G64126 NA non-coding downstream 59475 3929616 ~ 3931626 (-)
G64119 NA non-coding downstream 71211 3919670 ~ 3919890 (-)
G62699 NA non-coding downstream 359097 3631538 ~ 3632004 (-)
G62682 NA non-coding downstream 392066 3598826 ~ 3599035 (-)
G64168 NA non-coding upstream 60931 4054537 ~ 4055332 (-)
G64169 NA non-coding upstream 63611 4057217 ~ 4059152 (-)
G64332 NA non-coding upstream 224147 4217753 ~ 4220928 (-)
G64237 NA non-coding upstream 237587 4229950 ~ 4236416 (-)
G64382 NA non-coding upstream 289150 4282756 ~ 4283085 (-)
CI01000010_03527436_03530341 NA other downstream 459449 3527408 ~ 3530359 (-)
G61965 NA other downstream 2446050 1424425 ~ 1545051 (-)
G61888 NA other downstream 2745083 1244469 ~ 1246018 (-)
G61045 NA other downstream 3415590 572753 ~ 575511 (-)
CI01000010_04612793_04613017 SMIM15 other upstream 618890 4612460 ~ 4613135 (-)
G64564 NA other upstream 1055549 5049155 ~ 5242926 (-)
G64877 NA other upstream 1922651 5916257 ~ 5917011 (-)
G64918 NA other upstream 2100083 6093689 ~ 6096480 (-)

Expression


Co-expression Network