Gene
RNA
| Item | Value |
|---|---|
| gene id | G65038 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 6429081 ~ 6429383 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: putative aminopeptidase W07G4.4 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU74021 | True | 303 | lncRNA | 0.31 | 1 | 6429081 | 6429383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_06253230_06263855 | LONRF1L, LONRF1 | coding | downstream | 165226 | 6252366 ~ 6263855 (-) |
| CI01000010_06180084_06216445 | DOC2D | coding | downstream | 212636 | 6180084 ~ 6216445 (-) |
| CI01000010_06107283_06108881 | UGT5E1 | coding | downstream | 320092 | 6105579 ~ 6108989 (-) |
| CI01000010_06083696_06089271 | NA | coding | downstream | 339507 | 6083543 ~ 6089574 (-) |
| CI01000010_05921406_05962819 | NA | coding | downstream | 466262 | 5921124 ~ 5962819 (-) |
| CI01000010_06456276_06481282 | SLC5A5 | coding | upstream | 26893 | 6456276 ~ 6481427 (-) |
| CI01000010_06504062_06505040 | NA | coding | upstream | 74600 | 6503983 ~ 6505276 (-) |
| CI01000010_06588155_06615737 | ITGB4 | coding | upstream | 157837 | 6587220 ~ 6615737 (-) |
| CI01000010_06625010_06627729 | NA | coding | upstream | 194807 | 6624190 ~ 6627729 (-) |
| CI01000010_06639960_06641129 | NA | coding | upstream | 210197 | 6639580 ~ 6641139 (-) |
| G64993 | NA | non-coding | downstream | 103263 | 6266792 ~ 6325818 (-) |
| G64953 | NA | non-coding | downstream | 216071 | 6212792 ~ 6213010 (-) |
| G64952 | NA | non-coding | downstream | 216481 | 6212285 ~ 6212600 (-) |
| G64951 | NA | non-coding | downstream | 217029 | 6211357 ~ 6212052 (-) |
| G64950 | NA | non-coding | downstream | 219540 | 6207640 ~ 6209541 (-) |
| G65039 | NA | non-coding | upstream | 160 | 6429543 ~ 6429759 (-) |
| G65040 | NA | non-coding | upstream | 806 | 6430189 ~ 6430389 (-) |
| G65041 | NA | non-coding | upstream | 9482 | 6438865 ~ 6439082 (-) |
| G65045 | NA | non-coding | upstream | 65055 | 6494438 ~ 6495080 (-) |
| G65046 | NA | non-coding | upstream | 66096 | 6495479 ~ 6495945 (-) |
| G64918 | NA | other | downstream | 332601 | 6093689 ~ 6096480 (-) |
| G64877 | NA | other | downstream | 512070 | 5916257 ~ 5917011 (-) |
| G64564 | NA | other | downstream | 1186155 | 5049155 ~ 5242926 (-) |
| CI01000010_04612793_04613017 | SMIM15 | other | downstream | 1815525 | 4612460 ~ 4613135 (-) |
| G64237 | NA | other | downstream | 2192665 | 4229950 ~ 4236416 (-) |
| G65453 | NA | other | upstream | 1234308 | 7659435 ~ 7672343 (-) |
| CI01000010_07880416_07900104 | NA | other | upstream | 1413253 | 7880375 ~ 7900104 (-) |
| G67099 | NA | other | upstream | 2212307 | 8641690 ~ 8674897 (-) |
| CI01000010_11929215_11933223 | DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L | other | upstream | 5499578 | 11928448 ~ 11933343 (-) |
| CI01000010_11965317_11969111 | NA | other | upstream | 5535482 | 11964865 ~ 11969710 (-) |
