G98208


Basic Information

Item Value
gene id G98208
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8033091 ~ 8035465 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132355
gccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaaacataaaaccacggctgatcaaatcacgcagaattcaatgtgcaccccaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtggtctaaaaccaggtgtttcagtttcattgtcc

Function

NR:

description
protocadherin 2 alpha a 15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132355 True 224 lncRNA 0.46 2 8033091 8035465

Neighbor

gene id symbol gene type direction distance location
LOC103046986 NA coding downstream 41601 7972577 ~ 7991490 (-)
kcnn4 kcnn4,LOC107699521,LOC107595330,LOC107714738,LOC107570842,LOC107723512 coding downstream 64220 7917463 ~ 7968871 (-)
LOC103045648 NA coding downstream 142796 7884247 ~ 7890295 (-)
LOC103046166 NA coding downstream 191009 7833619 ~ 7842082 (-)
LOC103043627 NA coding downstream 300477 7727311 ~ 7732614 (-)
has1 has1,LOC107723422,LOC107714739,LOC107657615,LOC107699477 coding upstream 57998 8093463 ~ 8103010 (-)
LOC111193439 LOC108429926 coding upstream 199068 8234533 ~ 8240433 (-)
LOC111193440 NA coding upstream 206588 8242053 ~ 8247527 (-)
LOC107197658 NA coding upstream 217186 8252651 ~ 8260373 (-)
LOC103047384 NA coding upstream 229060 8264525 ~ 8269991 (-)
G98174 NA non-coding downstream 75632 7957110 ~ 7957459 (-)
G98158 NA non-coding downstream 117608 7841073 ~ 7915483 (-)
G98165 smg9,LOC107595308 non-coding downstream 132298 7898014 ~ 7900793 (-)
G98153 NA non-coding downstream 239849 7790562 ~ 7793242 (-)
G98108 NA non-coding downstream 310805 7721304 ~ 7722286 (-)
G98217 NA non-coding upstream 72293 8107758 ~ 8108013 (-)
G98312 NA non-coding upstream 152179 8187644 ~ 8197794 (-)
G98325 NA non-coding upstream 183215 8218680 ~ 8221798 (-)
G98335 NA non-coding upstream 241631 8277096 ~ 8277791 (-)
G98358 NA non-coding upstream 312820 8348285 ~ 8356069 (-)
LOC103044427 NA other downstream 224949 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 253807 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 323586 7684766 ~ 7709505 (-)
LOC103044954 LOC103044954,LOC108429942,LOC100705775,LOC107699547,LOC107589412,LOC107582081,LOC103388254,LOC107599504,LOC103356523,LOC101077558 other downstream 1182253 6843486 ~ 6850838 (-)
G97793 LOC103046199 other downstream 2010208 6015843 ~ 6022883 (-)
prelid3a prelid3a,LOC107715058 other upstream 431711 8467176 ~ 8475912 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other upstream 740333 8775798 ~ 8795749 (-)
LOC103034868 NA other upstream 866003 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 1126936 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 1494171 9529636 ~ 9537670 (-)

Expression


Co-expression Network