G98335


Basic Information

Item Value
gene id G98335
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8277096 ~ 8277791 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132549
gCAATATGATATGGTGGCTTTTAAGTGCAATTTATAATGCGATACAGAAAGAAACTGCCCTTATGTTGATGCTAATATTCTAATCTTGCTAATCTACATGCATGTGCACGAGGGGCATAGCGGTGCACATATCAGATATCAGATATGATTTTAAATACTAAAGTCAATATTTGAAGTGATTTAGTATCAAACTGATCAAATTACATAATCAAATGTAATTTGATTACAACACGAACCCCGCCCCCTCAGATTGCCCTCAGATACCTGGTTAAGACTGTTGACTGACTTTTACAATACAGCAAATAAGAGACCTTCAGAAAAATGACCTGACAATAGTTTACATTTCACTACAGCaacgttttaaaatagattattcGCACGTGTAATGATATCAGtagatactgatactgatatgaTATAATAGCTATATCATCCAAAGGTTCAAAATTGGCCACTTTGTGGTCAGCAATTCAGCTTCATTATCGTGGCTTAGATTTAAAccacattcatttttaaaacactataGGTTAGTTTCCCATGTGTTGCTTTTAATAGAAAATCTCTATTAAAAATGCTTTGTAATCCCTTATGGGTTAGATTCCCATAGAGGGATTAATCCTAGTCTTGCACTACATACAGgtacatctttaaaaaaaaagtgaacatcatttaaatgtttttaaactttatttcagt

Function

NR:

description
PREDICTED: TBC1 domain family member 15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132549 True 696 lncRNA 0.33 1 8277096 8277791

Neighbor

gene id symbol gene type direction distance location
LOC103047384 NA coding downstream 7105 8264525 ~ 8269991 (-)
LOC107197658 NA coding downstream 16723 8252651 ~ 8260373 (-)
LOC111193440 NA coding downstream 29569 8242053 ~ 8247527 (-)
LOC111193439 LOC108429926 coding downstream 36663 8234533 ~ 8240433 (-)
has1 has1,LOC107723422,LOC107714739,LOC107657615,LOC107699477 coding downstream 174086 8093463 ~ 8103010 (-)
fam84b fam84b coding upstream 129180 8406971 ~ 8409249 (-)
LOC103027825 NA coding upstream 232006 8509797 ~ 8512298 (-)
nsmce2 nsmce2 coding upstream 325317 8603108 ~ 8606859 (-)
zhx2 zhx2 coding upstream 346511 8624302 ~ 8647582 (-)
LOC103029934 LOC108443716,LOC106606150 coding upstream 435081 8712872 ~ 8721805 (-)
G98325 NA non-coding downstream 55298 8218680 ~ 8221798 (-)
G98312 NA non-coding downstream 79302 8187644 ~ 8197794 (-)
G98217 NA non-coding downstream 169083 8107758 ~ 8108013 (-)
G98208 NA non-coding downstream 241631 8033091 ~ 8035465 (-)
G98174 NA non-coding downstream 319637 7957110 ~ 7957459 (-)
G98358 NA non-coding upstream 70494 8348285 ~ 8356069 (-)
G98362 NA non-coding upstream 96851 8374642 ~ 8374851 (-)
G98363 NA non-coding upstream 108648 8386439 ~ 8386730 (-)
LOC111193401 NA non-coding upstream 161239 8439030 ~ 8439685 (-)
G98377 NA non-coding upstream 179827 8457618 ~ 8529454 (-)
LOC103044427 NA other downstream 468954 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 497812 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 567591 7684766 ~ 7709505 (-)
LOC103044954 LOC103044954,LOC108429942,LOC100705775,LOC107699547,LOC107589412,LOC107582081,LOC103388254,LOC107599504,LOC103356523,LOC101077558 other downstream 1426258 6843486 ~ 6850838 (-)
G97793 LOC103046199 other downstream 2254213 6015843 ~ 6022883 (-)
prelid3a prelid3a,LOC107715058 other upstream 189385 8467176 ~ 8475912 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other upstream 498007 8775798 ~ 8795749 (-)
LOC103034868 NA other upstream 623677 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 884610 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 1251845 9529636 ~ 9537670 (-)

Expression


Co-expression Network