G98363


Basic Information

Item Value
gene id G98363
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8386439 ~ 8386730 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132586
cagagttcaaaagaggacaaattgttggtgcacgtcttgctggcacatctgtgaccaagacagcaagtctttgtgatgcatcaagagccacggtatccagggtaatgtcagcataccaccaagaaggaccaaccacatacaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaacaacataaaaccacggctgatcaaatcacgcagaattcaatgtgcacctcaactctcctgtttccaccagaact

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU132586 True 292 lncRNA 0.47 1 8386439 8386730

Neighbor

gene id symbol gene type direction distance location
LOC103047384 NA coding downstream 116448 8264525 ~ 8269991 (-)
LOC107197658 NA coding downstream 126066 8252651 ~ 8260373 (-)
LOC111193440 NA coding downstream 138912 8242053 ~ 8247527 (-)
LOC111193439 LOC108429926 coding downstream 146006 8234533 ~ 8240433 (-)
has1 has1,LOC107723422,LOC107714739,LOC107657615,LOC107699477 coding downstream 283429 8093463 ~ 8103010 (-)
fam84b fam84b coding upstream 20241 8406971 ~ 8409249 (-)
LOC103027825 NA coding upstream 123067 8509797 ~ 8512298 (-)
nsmce2 nsmce2 coding upstream 216378 8603108 ~ 8606859 (-)
zhx2 zhx2 coding upstream 237572 8624302 ~ 8647582 (-)
LOC103029934 LOC108443716,LOC106606150 coding upstream 326142 8712872 ~ 8721805 (-)
G98362 NA non-coding downstream 11588 8374642 ~ 8374851 (-)
G98358 NA non-coding downstream 30370 8348285 ~ 8356069 (-)
G98335 NA non-coding downstream 108648 8277096 ~ 8277791 (-)
G98325 NA non-coding downstream 164641 8218680 ~ 8221798 (-)
G98312 NA non-coding downstream 188645 8187644 ~ 8197794 (-)
LOC111193401 NA non-coding upstream 52300 8439030 ~ 8439685 (-)
G98377 NA non-coding upstream 70888 8457618 ~ 8529454 (-)
G98385 NA non-coding upstream 107537 8494267 ~ 8494651 (-)
G98391 NA non-coding upstream 116746 8503476 ~ 8505489 (-)
G98407 NA non-coding upstream 157403 8544133 ~ 8544349 (-)
LOC103044427 NA other downstream 578297 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 607155 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 676934 7684766 ~ 7709505 (-)
LOC103044954 LOC103044954,LOC108429942,LOC100705775,LOC107699547,LOC107589412,LOC107582081,LOC103388254,LOC107599504,LOC103356523,LOC101077558 other downstream 1535601 6843486 ~ 6850838 (-)
G97793 LOC103046199 other downstream 2363556 6015843 ~ 6022883 (-)
prelid3a prelid3a,LOC107715058 other upstream 80446 8467176 ~ 8475912 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other upstream 389068 8775798 ~ 8795749 (-)
LOC103034868 NA other upstream 514738 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 775671 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 1142906 9529636 ~ 9537670 (-)

Expression


Co-expression Network