G98174


Basic Information

Item Value
gene id G98174
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 7957110 ~ 7957459 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132319
ctagaaatgcgcactctctctgcttttagactctttggcccgtttttctgcgctagaaatgcacactctctccgcttttagactctttgccccgtttttttgcgctagcaatgtgcaccctctccgcttttagactctttggcccgtttttctgcgctagaaatgcacactctctccgcttttagactctttagcccgtttttctgcgctagaaatgcacactctctccgcttttagactctttg

Function

NR:

description
protocadherin 2 gamma 5 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132319 True 245 lncRNA 0.47 2 7957110 7957459

Neighbor

gene id symbol gene type direction distance location
LOC103045648 NA coding downstream 66815 7884247 ~ 7890295 (-)
LOC103046166 NA coding downstream 115028 7833619 ~ 7842082 (-)
LOC103043627 NA coding downstream 224496 7727311 ~ 7732614 (-)
cadm4 cadm4,LOC107657657,LOC107582091,LOC107723444,LOC107699529,LOC107714698 coding downstream 285930 7298885 ~ 7671180 (-)
rps19 rps19,LOC107657656,LOC100689943 coding downstream 690088 7259988 ~ 7267022 (-)
LOC103046986 NA coding upstream 15118 7972577 ~ 7991490 (-)
has1 has1,LOC107723422,LOC107714739,LOC107657615,LOC107699477 coding upstream 136004 8093463 ~ 8103010 (-)
LOC111193439 LOC108429926 coding upstream 277074 8234533 ~ 8240433 (-)
LOC111193440 NA coding upstream 284594 8242053 ~ 8247527 (-)
LOC107197658 NA coding upstream 295192 8252651 ~ 8260373 (-)
G98158 NA non-coding downstream 41627 7841073 ~ 7915483 (-)
G98165 smg9,LOC107595308 non-coding downstream 56317 7898014 ~ 7900793 (-)
G98153 NA non-coding downstream 163868 7790562 ~ 7793242 (-)
G98108 NA non-coding downstream 234824 7721304 ~ 7722286 (-)
G98106 NA non-coding downstream 277071 7679635 ~ 7680039 (-)
G98208 NA non-coding upstream 75632 8033091 ~ 8035465 (-)
G98217 NA non-coding upstream 150299 8107758 ~ 8108013 (-)
G98312 NA non-coding upstream 230185 8187644 ~ 8197794 (-)
G98325 NA non-coding upstream 261221 8218680 ~ 8221798 (-)
G98335 NA non-coding upstream 319637 8277096 ~ 8277791 (-)
LOC103044427 NA other downstream 148968 7781480 ~ 7808142 (-)
LOC103043934 LOC103043934,LOC108429921 other downstream 177826 7769129 ~ 7779284 (-)
LOC111193437 NA other downstream 247605 7684766 ~ 7709505 (-)
LOC103044954 LOC103044954,LOC108429942,LOC100705775,LOC107699547,LOC107589412,LOC107582081,LOC103388254,LOC107599504,LOC103356523,LOC101077558 other downstream 1106272 6843486 ~ 6850838 (-)
G97793 LOC103046199 other downstream 1934227 6015843 ~ 6022883 (-)
prelid3a prelid3a,LOC107715058 other upstream 509717 8467176 ~ 8475912 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other upstream 818339 8775798 ~ 8795749 (-)
LOC103034868 NA other upstream 944009 8901468 ~ 8914931 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other upstream 1204942 9162401 ~ 9179368 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other upstream 1572177 9529636 ~ 9537670 (-)

Expression


Co-expression Network