LOC103046732


Basic Information

Item Value
gene id LOC103046732
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 8876271 ~ 8877553 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237847.3
gtttATTACTACTTCATTAGTTACTATGCATCTCAAGAAAGGAGGATGTAGATGCAGATACTTCTGGTTTCTAGAACTATTAGAAACTATTAGTTTTTCCACTCTTCACTAAATAAAGggataaactaataaatgatactgtctctgctctcctctctccacctcttttcTGCTCCTGAACACAAACAGAGTCTTGTTCTCGCAGAAGTGTGACCACATCATATCCCCGAACAAAGACGAGGCATTCTGCTGAAAAAGTACAGCATTGTTCTCCGCAGCATCATCTCACTCTGTGATTGGTTCTCCCAGTCTCAGCCTCACGTATCTCCGGGAGCGGGCGAGCAGTGAGCATGTCGGCGGGGAGGAAGATGATGGGCATCGCTCTGGGTCTCACAGGGTGGATCTTCGCCATCGTCACCAGCCTCCTGCCCATGTGGAAGATCTCCGACTTCACCGGGGCCAACCTGGTCGAGTCCCTGACCGTCTGGGAGGGGATCTGGATGAACTGCGTGGTTCAGAGCTCAGGACAGAAGCACTGCAGGGTTTACGACTCTGTTCTGGCTCTACCTTCAGACCTGCAGGCGGGAAGAACCACCACCCTCCTCTCCATCCTCACCGCCCTGCTGGCTCTCACCGTCTCCATCCTCGGAGTGAAGAGCACCAGCTACATCCAGGACGAGACGACCAAACTGAGAACTGTGTTCATCTCCGGAGTTCTGCTCGTCATCGCCGGGTTCCTGATGCTCATCCCCGTGTCCTGGACCAGCAGCAGGATCATGCAGGGGTTGGATACTTACGAGGACCAGAAATGGAGCACAGAGCTCGGAGCGTCGCTCTACACGGGGTTTATCTCCAGCGCCATGCTGATCACGGGAGGAGGCTTTCTGAGCTGCTCCAGCCGTCCATGGAGGAGAAGATAGAGATCTGTGAAACGTGGGGACGGTTGATCTGCTGTGGGAGCAAGATTTTCAAGAATCTGTTTGAAATGCAGAAGAATgcgaaaagaagaaaaacatgatgATTCAATAAAGACCTGTATCTGCATTGGTCTGTATTTGTTGTGGAATTTAAGAGCTGCTCTGGAAGCTGGTTCTCctgatctttaaaaaaagaaaatgtctgTATACTTTAATTTTAAGATGCTAACAAAGTACTGTAGAATTACATGCATGCAGAAATTATAacaattttcacattttttttgtgttgtttcaaACGTGTGTAATTGTAATAACTTTCTgcgattaatatttaattttctggAATAAACACTTTCATCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237847.3 True 1283 mRNA 0.47 1 8876271 8877553

Neighbor

gene id symbol gene type direction distance location
LOC111194070 LOC108435580,LOC108275533 coding upstream 42865 8816007 ~ 8833406 (+)
LOC103025127 NA coding upstream 62910 8801192 ~ 8813361 (+)
LOC103025429 egr4,LOC108435548,LOC107734701 coding upstream 78071 8794999 ~ 8798200 (+)
LOC103047651 si:ch73-290k24.6,LOC108435581,LOC108275467,LOC106608414,LOC103365252 coding upstream 95214 8775941 ~ 8781057 (+)
LOC103026051 map7 coding upstream 105837 8736022 ~ 8770434 (+)
ints11 cpsf3l coding downstream 10965 8888518 ~ 8900208 (+)
LOC103023874 acap3,LOC107706985,LOC107664201,LOC107697914,LOC103359731 coding downstream 43128 8920681 ~ 8993088 (+)
ube2j2 ube2j2,LOC108411519,LOC107697915,LOC107706988,LOC107599097,LOC107664234,LOC107593951 coding downstream 116258 8993811 ~ 8998737 (+)
LOC103023558 LOC108433383 coding downstream 124777 9002330 ~ 9017541 (+)
LOC103022619 LOC108433387,LOC108275864 coding downstream 189699 9067252 ~ 9097299 (+)
G130478 NA non-coding upstream 19631 8840686 ~ 8856640 (+)
G130476 NA non-coding upstream 37146 8836764 ~ 8839125 (+)
G130461 NA non-coding upstream 40229 8835156 ~ 8836042 (+)
G130470 ppp1r14c,LOC106608352 non-coding upstream 86003 8731706 ~ 8790268 (+)
G130459 NA non-coding upstream 93702 8721807 ~ 8782569 (+)
G130468 NA non-coding downstream 5384 8882937 ~ 8903073 (+)
G130462 NA non-coding downstream 49159 8926712 ~ 9001690 (+)
G130500 NA non-coding downstream 150492 9028045 ~ 9031375 (+)
G130504 LOC108433385 non-coding downstream 164566 9042119 ~ 9044107 (+)
G130505 NA non-coding downstream 166633 9044186 ~ 9044552 (+)
LOC103024807 LOC108435578,LOC107565318,LOC107701248 other upstream 5442 8853689 ~ 8870829 (+)
cda LOC108416503,LOC108433378 other upstream 210452 8662743 ~ 8665819 (+)
G130413 NA other upstream 311696 8563650 ~ 8564575 (+)
LOC103037383 LOC103037383,LOC108432529 other upstream 782217 8091731 ~ 8094054 (+)
lzic lzic,LOC107708836,LOC107681991,LOC107718820 other upstream 1267388 7601605 ~ 7608883 (+)
G130518 pip4k2c,LOC107598997,LOC107664235,LOC107593957,LOC107714989 other downstream 239617 9117170 ~ 9119782 (+)
spryd3 spryd3,LOC107714925,LOC107664113 other downstream 255022 9132575 ~ 9193778 (+)
nfe2 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC100710772 other downstream 428601 9306154 ~ 9322080 (+)
G130844 NA other downstream 879399 9756952 ~ 9757351 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other downstream 978853 9856406 ~ 9871772 (+)

Expression


Co-expression Network