LOC103037383 (LOC103037383,LOC108432529)


Basic Information

Item Value
gene id LOC103037383
gene name LOC103037383,LOC108432529
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 8091731 ~ 8094054 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU176159
aaactgtagcATTAAAATCATGGTCTCTTGCTGTTTCAGACTCAATGGAGGAGGCCGGAGCAGAGGAGCTCTCTGTATCGGATGTAGGCAGCCTCCTCCAGAGGGCAGCAGCTCTGGGCTACTCCCCACTGCTCTCCAGAGAGGGTCTGAAACTCAATGGGCTGCTGCCTAAAGAAGCTTCAAAAATGGTTGTGCTGGAAAATCCAGGCCATCTAACTTCTCTTGGTCAGCTGCTCGGCATTAAGAGGCAATACAGAAAGAGGGCCAATGGAGCCGACTGCTTCTGGAAGTACTGCGTTTAACACCGGCACTGGAAACAACACACAGGACTAAGAGACAGGGCTTTATTTCAGATTTAGTAcatgtacatacatatatacacgcacacacacatttacactaaaCAACAACAGAGCATAGCGAGAcgtaaatgagaaataacaccACTTGACTTTACTGTTGTGGGGAAGTTTCTAATTTTGCACACTGACAATTCTGTGctagactgtgtgtgtgatgcttGATACTGGATTGTCTGGTTTAATTGTTTGATCCTTGTAAGAAAGGCTGTAATGTGAATAAACTGACCATAAATAAAGAATACCATTTAGAAA
>XM_007246836.3
CACACGTCTATATCCTTTGCTCTGCTACATTTACCACTGTAGGTTTGGTAAGACAGCACTACTGTAGAGATGATCAGCGGCGTGCTCCTCTCCTGGGCTCTTCTCCTGCTCTCCATCAGCCCACTGCTGGCTCATCCTGTTTCAGACCCAGCAGATATGCCTTACACTGGACCAGACTCAATGGAGGAGGCCGGAGCAGAGGAGCTCTCTGTATCGGATGTAGGCAGCCTCCTCCAGAGGGCAGCAGCTCTGGGCTACTCCCCACTGCTCTCCAGAGAGGGTCTGAAACTCAATGGGCTGCTGCCTAAAGAAGCTTCAAAAATGGTTGTGCTGGAAAATCCAGGCCATCTAACTTCTCTTGGTCAGCTGCTCGGCATTAAGAGGCAATACAGAAAGAGGGCCAATGGAGCCGACTGCTTCTGGAAGTACTGCGTTTAACACCGGCACTGGAAACAACACACAGGACTAAGAGACAGGGCTTTATTTCAGATTTAGTAcatgtacatacatatatacacgcacacacacatttacactaaaCAACAACAGAGCATAGCGAGAcgtaaatgagaaataacaccACTTGACTTTACTGTTGTGGGGAAGTTTCTAATTTTGCACACTGACAATTCTGTGctagactgtgtgtgtgatgcttGATACTGGATTGTCTGGTTTAATTGTTTGATCCTTGTAAGAAAGGCTGTAATGTGAATAAACTGACCATAAATAAAGAATACCATTTAGAAAA

Function

NR:

description
prepro-urotensin II-alpha-like

GO:

id name namespace
GO:0065008 regulation of biological quality biological_process
GO:0008015 blood circulation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176159 False 614 TUCP 0.44 3 8092984 8094053
XM_007246836.3 True 751 mRNA 0.46 4 8091731 8094054

Neighbor

gene id symbol gene type direction distance location
LOC103036568 NA coding upstream 53281 8031533 ~ 8038450 (+)
LOC103035729 dvl1,dvl1a,LOC107708824,LOC107570850 coding upstream 72609 7949837 ~ 8019122 (+)
LOC103036256 mxra8 coding upstream 145068 7923863 ~ 7946663 (+)
aurkaip1 aurkaip1 coding upstream 169095 7919009 ~ 7922636 (+)
pex14 pex14,LOC107681981,LOC107708844,LOC107586529,LOC107716227,LOC107695784 coding upstream 1049697 6924949 ~ 7042034 (+)
LOC107197257 NA coding downstream 410419 8504473 ~ 8514270 (+)
ubxn10 NA coding downstream 423743 8517797 ~ 8519770 (+)
vwa5b1 vwa5b1,LOC107599492 coding downstream 437191 8531245 ~ 8559605 (+)
fam43b fam43b,LOC107706957 coding downstream 504222 8598276 ~ 8600737 (+)
LOC107197367 NA coding downstream 563048 8657102 ~ 8662247 (+)
G130255 NA non-coding upstream 36247 8053027 ~ 8055484 (+)
G130214 NA non-coding upstream 208290 7882041 ~ 7883441 (+)
LOC111194064 NA non-coding upstream 299587 7742944 ~ 7792144 (+)
G130185 NA non-coding upstream 353628 7735843 ~ 7738103 (+)
G130183 NA non-coding upstream 362084 7729376 ~ 7729647 (+)
LOC111194065 NA non-coding downstream 4810 8098864 ~ 8141048 (+)
G130384 NA non-coding downstream 394210 8488264 ~ 8489336 (+)
G130409 NA non-coding downstream 431907 8525961 ~ 8528242 (+)
G130417 NA non-coding downstream 485348 8579402 ~ 8582436 (+)
G130446 NA non-coding downstream 559237 8653291 ~ 8653771 (+)
lzic lzic,LOC107708836,LOC107681991,LOC107718820 other upstream 482848 7601605 ~ 7608883 (+)
G130120 LOC107716234,LOC107681965 other upstream 602490 7478355 ~ 7489241 (+)
G130119 NA other upstream 618773 7468385 ~ 7472958 (+)
tardbp tardbp,tardbpl,LOC107570713,LOC107586522,LOC107716231,LOC107681961,LOC107695779,LOC107708842 other upstream 676653 7408996 ~ 7415078 (+)
LOC103039794 RPS26,rps26l,rps26,LOC103039794,LOC108433306,LOC107708153,LOC100304574 other upstream 2490270 5599278 ~ 5601461 (+)
G130413 NA other downstream 469596 8563650 ~ 8564575 (+)
cda LOC108416503,LOC108433378 other downstream 568689 8662743 ~ 8665819 (+)
LOC103024807 LOC108435578,LOC107565318,LOC107701248 other downstream 759635 8853689 ~ 8870829 (+)
G130518 pip4k2c,LOC107598997,LOC107664235,LOC107593957,LOC107714989 other downstream 1023116 9117170 ~ 9119782 (+)
spryd3 spryd3,LOC107714925,LOC107664113 other downstream 1038521 9132575 ~ 9193778 (+)

Expression


Co-expression Network