ubxn10


Basic Information

Item Value
gene id ubxn10
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 8517797 ~ 8519770 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240953.3
GATAACTGTTTTTGGTCAAGCAGAGTAATCTGGCCCACATTTAGCTCTACCGCTCCCACATATATTATCCCCGTGATAATTAGTGCTGGATCTAAGTCTAGTTAAACGTTCAGAATTttttctataaatataaaaatgacggtccagtatttgttttatttatatcgGATCAGCTGTACTGAGATCAGCTGTACTGCGGGAGGGGGGCGGAGCGTCAGCGCGTGGGAAGCGTTGCTATGGGAACGGTGCTGTTGGTAACGGCGGAGTGACGCGGGGAAAATGTCTCCGGTGGATCAGAACCGAACCGCGGACTGACCGCCGCTCAAAACACACGAGAGGAACATGCACATGACCCGACCCAAATCCTCAAAAGGCCGCAGCAGAGCGAGGCTGACTCTGGGCCTGGAGGACGGTGTTCATCAGGGCCACGTGTTTTTACcccatcctcctcttcctcatcctcctccgTTGTCTTCATCCACAGAGGTTTCTCCAAGAACTGTCCTCAGACAGGCCGGCAGGTCCAGTGCAGAGGTCCTCACTGAAGTCTTTCCGGAGGAGGAGACGCTTCCAGTCCTgaactttaataaatacaagGTTCTTCCCTCTATAGAGAAAAGGCCTGAGGCTGAGAAATCGATCAGAGGGGCGGAAGAAAAGACCTCGAGCCTCAGTCTGTCCGACAGCAGAGATCATCTTCACTTCGCCCAGCGCCTCTGTTCTCGCTCTGCATCCAGGGGCGACTCGGAGACGAAGCGCGGGTCTGAGGAACAGCGCGGTCCTCCTGCGGCAGCAGACACGCGGAGGACGTCTCGCGGACACTCTGAGAGTGAGACAGGTGCAGGTGATGCACATCTGCTCCTCGCTATTCGAACTCCACGCGGTCAAAGGTTCAAGTGCCATTTCCAGCCCACAGACACTCTCCAGACCGTCGTAGCCGCCGCCCAGCTCCAATCCGGAGAACAGTACCAACACGCGGTCATCGAGACCATGGAGGTTCCCCGGCAGACCTTCACTAATCTGACCAGGAGTCTGTCTCAGTGCGGCATCTGCAATAAATCACTTCTCATCATCAGCCTGGAGGACAGCGCTGTGGACTCGGATTAGAACCCAATGATTAAAGGCTGGTTTTCTGGATCGACACTAAACCCAGTGCATTATCTCCTGATCCTGTTCTCTCTGCTCCAATCAGCAGATAAATCTGATGTTTTATATCAGAAAAACAGTCTAATGTAAAAAGgcacagggttgagaaacactggccaACTTAATTAAAAGATCAATTCCGTCCCCAGTTTACACTGCGTTTACACTTCACACATGTCTAAATCCTGACTTCTTCTGCTTCAGAGTTTTAAGGTCTTCAATGAAACTTAAACTATTTGAGTTTAGTAttgattattataatatttagagCTGAACTATATTGAGCAATAATTGGAACAATAAATGGTATTTACTACTA

Function

NR:

description
UBX domain-containing protein 10

GO: NA

KEGG:

id description
K24352 UBXN10; UBX domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240953.3 True 1465 mRNA 0.49 2 8517797 8519770

Neighbor

gene id symbol gene type direction distance location
LOC107197257 NA coding upstream 3527 8504473 ~ 8514270 (+)
LOC103036568 NA coding upstream 479347 8031533 ~ 8038450 (+)
LOC103035729 dvl1,dvl1a,LOC107708824,LOC107570850 coding upstream 498675 7949837 ~ 8019122 (+)
LOC103036256 mxra8 coding upstream 571134 7923863 ~ 7946663 (+)
aurkaip1 aurkaip1 coding upstream 595161 7919009 ~ 7922636 (+)
vwa5b1 vwa5b1,LOC107599492 coding downstream 11475 8531245 ~ 8559605 (+)
fam43b fam43b,LOC107706957 coding downstream 78506 8598276 ~ 8600737 (+)
LOC107197367 NA coding downstream 137332 8657102 ~ 8662247 (+)
pink1 pink1,LOC107580618 coding downstream 147198 8666968 ~ 8672285 (+)
agmat agmat,LOC102790280 coding downstream 153130 8672900 ~ 8678108 (+)
G130384 NA non-coding upstream 28461 8488264 ~ 8489336 (+)
LOC111194065 NA non-coding upstream 376749 8098864 ~ 8141048 (+)
G130255 NA non-coding upstream 462313 8053027 ~ 8055484 (+)
G130214 NA non-coding upstream 634356 7882041 ~ 7883441 (+)
LOC111194064 NA non-coding upstream 725653 7742944 ~ 7792144 (+)
G130409 NA non-coding downstream 6191 8525961 ~ 8528242 (+)
G130417 NA non-coding downstream 59632 8579402 ~ 8582436 (+)
G130446 NA non-coding downstream 133521 8653291 ~ 8653771 (+)
G130447 NA non-coding downstream 136537 8656307 ~ 8656745 (+)
G130459 NA non-coding downstream 202037 8721807 ~ 8782569 (+)
LOC103037383 LOC103037383,LOC108432529 other upstream 423743 8091731 ~ 8094054 (+)
lzic lzic,LOC107708836,LOC107681991,LOC107718820 other upstream 908914 7601605 ~ 7608883 (+)
G130120 LOC107716234,LOC107681965 other upstream 1028556 7478355 ~ 7489241 (+)
G130119 NA other upstream 1044839 7468385 ~ 7472958 (+)
tardbp tardbp,tardbpl,LOC107570713,LOC107586522,LOC107716231,LOC107681961,LOC107695779,LOC107708842 other upstream 1102719 7408996 ~ 7415078 (+)
G130413 NA other downstream 43880 8563650 ~ 8564575 (+)
cda LOC108416503,LOC108433378 other downstream 142973 8662743 ~ 8665819 (+)
LOC103024807 LOC108435578,LOC107565318,LOC107701248 other downstream 333919 8853689 ~ 8870829 (+)
G130518 pip4k2c,LOC107598997,LOC107664235,LOC107593957,LOC107714989 other downstream 597400 9117170 ~ 9119782 (+)
spryd3 spryd3,LOC107714925,LOC107664113 other downstream 612805 9132575 ~ 9193778 (+)

Expression


Co-expression Network