G130844


Basic Information

Item Value
gene id G130844
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 9756952 ~ 9757351 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU176928
gtaagagcagagtgtgaaggttcaattagcagggtaagagcacagttctgctcttaatattaaaatattgcaatgcacacaacattatgggagacataccagagttcaaaagaggacaaattgttggtgcacgtcttgctggagcatctgtgaccaagacagcaagtctttgtgatgcatcaagagccacggtatccagggtaatgtctgcataccaccaagaaggaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccacggctgatcaaatcacgcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176928 True 400 TUCP 0.45 1 9756952 9757351

Neighbor

gene id symbol gene type direction distance location
LOC111194074 calcoco1a,LOC108433409 coding upstream 111186 9618358 ~ 9645766 (+)
cbx5 cbx5,LOC103047453,LOC107664188,LOC107707003,LOC107714996 coding upstream 424534 9322681 ~ 9332418 (+)
znf740 znf740 coding upstream 503881 9245472 ~ 9253071 (+)
csad csad,LOC107697858,LOC107599458,LOC107706996 coding upstream 514171 9230530 ~ 9242781 (+)
LOC103043576 NA coding upstream 532241 9220634 ~ 9224711 (+)
LOC103044467 LOC108433411,LOC108276259 coding downstream 16759 9774110 ~ 9793416 (+)
mfsd5 mfsd5,LOC107594050,LOC107664134,LOC107599659,LOC107599644,LOC107697860 coding downstream 38840 9796191 ~ 9798893 (+)
LOC103043867 LOC108433414,LOC104967021,LOC106572606 coding downstream 65281 9822632 ~ 9846742 (+)
LOC103039028 LOC108433422 coding downstream 172484 9929835 ~ 9976607 (+)
c1qtnf12 fam132a,LOC107591142,LOC107687484,LOC107716139,LOC107593919 coding downstream 264414 10021765 ~ 10060015 (+)
G130814 NA non-coding upstream 88850 9665520 ~ 9668102 (+)
G130811 NA non-coding upstream 100592 9655387 ~ 9656360 (+)
G130807 NA non-coding upstream 108010 9646274 ~ 9648942 (+)
G130806 NA non-coding upstream 140852 9615894 ~ 9616100 (+)
G130763 hoxc6,hoxc6aa,LOC103034651,LOC108433405,LOC105013626 non-coding upstream 267354 9488526 ~ 9489598 (+)
G130842 NA non-coding downstream 62283 9819634 ~ 9848200 (+)
G130849 NA non-coding downstream 71808 9829159 ~ 9829420 (+)
G130864 kansl2,LOC107591080,LOC107737532,LOC107716132,LOC107687436,LOC107593923 non-coding downstream 120957 9878308 ~ 9879577 (+)
G130855 NA non-coding downstream 188859 9946210 ~ 9978596 (+)
G130854 NA non-coding downstream 221504 9978855 ~ 9981835 (+)
nfe2 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC100710772 other upstream 434872 9306154 ~ 9322080 (+)
spryd3 spryd3,LOC107714925,LOC107664113 other upstream 563174 9132575 ~ 9193778 (+)
G130518 pip4k2c,LOC107598997,LOC107664235,LOC107593957,LOC107714989 other upstream 637170 9117170 ~ 9119782 (+)
LOC103024807 LOC108435578,LOC107565318,LOC107701248 other upstream 886123 8853689 ~ 8870829 (+)
cda LOC108416503,LOC108433378 other upstream 1091133 8662743 ~ 8665819 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other downstream 99055 9856406 ~ 9871772 (+)
mlh3 mlh3,LOC107591079 other downstream 153956 9911307 ~ 9920995 (+)
LOC103038829 NA other downstream 165630 9922981 ~ 9928233 (+)
LOC107197146 NA other downstream 1058509 10815860 ~ 10829558 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other downstream 1734212 11491563 ~ 11502723 (+)

Expression


Co-expression Network