G131313 (LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063)


Basic Information

Item Value
gene id G131313
gene name LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 11491563 ~ 11502723 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU177643
AATGCAACATTCTAAAAATTGTTATGCCTCTATCTATAGATCATCTCTTTTGAagcacaaatatatatacagctattCACATAATTCCCATTAGCACACAACCCATCAGCCCTGAAGGTCTGAGCAGTGTCTGAACTGCTCGAGCAGGAAGCTCAGTGTCCCAGCCTGGCAGGAAAATCATATATCTCAGGACACGTCCTTATCTGGACCACCCTCGTGGTCTTCATGCTTGACTGGCCTTTCTAAGAACGAACCACACAGCAAAAACTGACGATTCACCTTCTTTCTCGTGCAGGACGTTGAAGGGCTGCAGCAGCTCGTGCTTGGCACACTCCACCTCACTGAAGAACACTCTGGAGGTCTTCATCTTCAGCCCGTACTGTTTGCTCGGGTCCCGTTTGTAAACAGTGGTCCTCCGGCCGGAGTCTTTAGCCTTCCCTTCTCCGGTGCTGACCAGCACGTCCACAGCGTAGACCTCATGCACCTCAAACTCAGCTTTCTCATGATCCTTCCTCTGCTGGTCTGTGGGGTTCTGAATGATGGTCTTCTCTCCGTCGATGACGTGCTGCTTCAGCTGATGGGACAGCATTCCCTCGACAGCGTTGCACTTGAAGGACTGAGCGATCTTGTTCCAGGCCTCGGTGAGCTGAGTGTtCTGGTTCCCAGGCTTAACCAGTCGCAGAGCTGCTTCGGCACAAAGGTGGGCTGCCTTGATAACATCTGCCTTGCGGCCGGTCACTGGAGCGTCCTTGCTCGCACCGACCACGAAGCTGTGAGCTACATTGGAGATGAAACCATCCACATGCACTCCAAGATCAattttaacCAAGTCACCGTCTTGCAGTGTGTAGTCAGGGTCGCTCTTCAGGGGAGAGAAGTGGCACACGAAGTTGTTGACGGACACGCAGGTGGGGAAGGCAATCCCttcttTATCTCCTTCTCCTTCTTGAACACCTTGCCGGTCTCTGCAGCGATGAAGGCGTCTCCTTTCTCACACAGGCTGAGCACGGACACTCCGGGTTTAGCTGCTTCAGTCACGGCCTTCAGAGCccGGTTCGCTATGTCCGCCCCCATCTTGTACTTGGTGACCACCAAGTCCTCGGCGATGGTCTGCTCCTGCTGCTCGTCCTCTGACATGTTTTCTCTCGGCGGATCCGCGGACTGGAACTTTTCTCTTCGGGCTGAAGCCACGCTCAGATCCTCACACACGCGCTACCGATGCCCGACTCGGCAGGGAATCGTTCATATGAGTCGGTTCTTTTC

Function

NR:

description
PREDICTED: proliferation-associated protein 2G4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177643 True 1263 TUCP 0.53 10 11491563 11502723

Neighbor

gene id symbol gene type direction distance location
LOC103032800 lrp1,LOC108425568,LOC107593902,LOC107673053 coding upstream 128212 11185748 ~ 11363351 (+)
LOC103046525 LOC108425571 coding upstream 363643 11115529 ~ 11127920 (+)
fitm2 NA coding upstream 377599 11110370 ~ 11113964 (+)
ada ada coding upstream 502063 10969289 ~ 10989500 (+)
LOC103044697 gdi1,LOC108276388,LOC108425579,LOC107564645 coding upstream 604477 10874498 ~ 10887086 (+)
LOC103033368 LOC108425561,LOC108276129,LOC107593912,LOC107673097,LOC107737522,LOC107591068,LOC107716150 coding downstream 148786 11651509 ~ 11665934 (+)
LOC103033689 avpr2,LOC106567019 coding downstream 205630 11708353 ~ 11742030 (+)
LOC103045529 LOC108425554 coding downstream 304077 11806800 ~ 11909123 (+)
LOC103036846 LOC103036846,LOC108425493 coding downstream 466058 11968781 ~ 11970846 (+)
LOC103037687 NA coding downstream 489519 11992242 ~ 11994812 (+)
G131299 NA non-coding upstream 5917 11435797 ~ 11485646 (+)
G131086 NA non-coding upstream 416049 11074489 ~ 11075514 (+)
G131099 NA non-coding upstream 422353 11061853 ~ 11069210 (+)
G131094 NA non-coding upstream 444703 11040923 ~ 11046860 (+)
G131088 NA non-coding upstream 463587 10995674 ~ 11027976 (+)
G131315 NA non-coding downstream 2606 11505329 ~ 11508938 (+)
LOC111194082 NA non-coding downstream 11468 11514191 ~ 11516304 (+)
G131325 NA non-coding downstream 32334 11535057 ~ 11589420 (+)
G131329 NA non-coding downstream 50190 11552913 ~ 11555625 (+)
G131340 NA non-coding downstream 72670 11575393 ~ 11578282 (+)
LOC107197146 NA other upstream 662005 10815860 ~ 10829558 (+)
LOC103038829 NA other upstream 1563330 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 1570568 9911307 ~ 9920995 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other upstream 1619791 9856406 ~ 9871772 (+)
G130844 NA other upstream 1734212 9756952 ~ 9757351 (+)
LOC111194085 LOC108425553 other downstream 419617 11922340 ~ 11978761 (+)
LOC103031050 NA other downstream 737973 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 1186431 12689154 ~ 12763710 (+)
G131677 NA other downstream 1410768 12913491 ~ 12940847 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other downstream 3665285 15168008 ~ 15172897 (+)

Expression


Co-expression Network