LOC103033689 (avpr2,LOC106567019)


Basic Information

Item Value
gene id LOC103033689
gene name avpr2,LOC106567019
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 11708353 ~ 11742030 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677186.1
tctGAGCTCAAATTCAGCAGTATCAGCACACCAGTAGCCATTTAGTTTGGGAAATGAAGGCTCGGACACACACTTGTGAGGAGCACCGCTGTTATCCTGAGGAtatctctctttattctgtCTGGGACAACTTGCCTGAGGTCACGGGGACCCTGCCCCCTTAGACTGGGGTCAATCACAGGTTCACACAGGACAGGATCAGTGGGTGAAGGAATAGAGGGACAAATATTGGCTGGAGATTACATAAAGCATGTGGATTTGACCACAAGACAGCTAACAAAAACAGAGAGGAAGTGCTGCTGGAGTAAAGATCATGCACTGACAATCAGGCCTGATGGAGAGCATCTCAGAGGAGGCGGAATGGGATGGCTCTGCTCACGGGACGGTCCAGTGGATCAACTTCACCTCAGCTCTTCTCTCGGAGCGCGGGGGGCTCAACGGCTCTCATGGAGGCGGCTCGTATTTCTGGCTGCTTCACAACGGCTCCTCCAGCACCACTCAGGTCCCCCCTCCAGCCAGAGTGCGAGACGTGGCCCTGGCCCACGCTGAGGTAGGGGTCCTGGGTCTGGTTCTGGCCCTCGCCACCCTGGGAAACAGCTTCGTTCTGTGGGTTCTGCTGCGGAGACGCAAATACAACGCTCCCATGCATCTGTTCATGGTCAACTTGTGTGTAGCTGACCTGGTGGTGGCCTTCTTTCAGGTTCTCCCTCAGCTAGTCTGGGACATCACGGAAAGGTTCCAGGGTCCGGACGCTCTGTGCCGCTCAGTGAAGTACATGCAGATCGTGGGAATGTTTGCGTCCTCCTACATGATCGTGGCGATGACGGTGGACAGGCATTACGCCATCTGCTGCCCCCTGCAGGCCTACAGAGGAGGCGTGGTCTCGCGCTGGAACACACCAATCATGGTGGCCTGGGGGCTGGCCCTCGTGCTCAGTGTACCACAGGTGTTTATTTTCTCCAGATCTGAGGTGGCTCCAGGGGAGTTTGAGTGCTGGGGGCACTTTGCCGAGCCCTGGGGTCTCAAGGCCTACGTAACCTGGATGACCCTGGCTGTGTTCGTCCTGCCGGCCCTGATCATCACCGTCTGCCAGGTGCGAATCTTCAGAGAGATCCACGACAACATCTATCTGAAGTCGGAGCGGGTGGTGTCGGCAGACTTCAAGAAAAACCTGGTCTTCTTCCATTTCCCCGGCCTGAGAACGCAGGaggacagaatgagagagagaacgagaggagGACACGCAGAAGAATTCCCACTGAAGAACAATAACAGCCAATCTTCAAATCCGCACTGTGAGAACTAcagctcccagcatgcaccacaGCCGGACTGTGAGGGGTGTGGGTGTGAGCTGAGCACAGGCTATAGCTCGTCCAGATCTCCTGATGTGCTGCCTCACTctcacaatactcacaatactcacaatactcaccAGAACTCACCAGcgcctcatcaggaccactctcTGAGGCAGAAGGTCTTCTCTGAGACGGATCCGTCTTGCTACCAGACCTCTCTGCCTTATTTAAACTCTCTGGAGCCCCTAACAGAGGGGTCAGACCCAGTCCATTACCCCCCCTGTTTCCCTCCCCGCTCCCTGCCCCCACCTCCGCCCGGCGTCTCCAGAGCAATGTCCAAAACTGTGAGGATGACTCTGGTCATAGTGCTGGTGTACACCATGTGCTGGTCACCCTTCTTCATAGTACAGCTCTGGGCTGCGTGGGACCCCAACCCACCGGTACAAGGAGTGGCCTTCACCATACTGATGCTGCTGGCCAGTCTGAACTCCTGCACCAACCCCTGGATCTACACAGCCTTCTCCAGCAGCGTATCCCACGAGCTCCTGGCTCTGCTGCGCTGCCGGCCGCGACCCGTACACCGGGGGTCCACTCTGGAAGACTCCAGCACCatccacaccaccaccaccaccaaggACAACCTCTACTGACCTACTGGGGTCGGCCAGACGTGGATCCGGGCTCTGCTCCTTGAACTTTACGGATAGTAGAGAATGAGATGATTTACAGAGGCCTGTATACTGTATTCACTCCAAGCAGCACATGAAATATGAGTGTGACTCCAGTGACATCCTGCAGAGGATCCTGCAGCGCATTCATTGTTATGTATGGAGTGGGTTTAGCCGTTTAGTGCAGCTGGAGCTGCAGCCAGAATGCGATTGACTGAAATGAGCTCATCTCGGGGCCTGTCGCATTTATTTATGACCAAACAAGACCGATTTATAACATGAACAAGAAACTAATGAAAATTCCACGCATAACAGGACGCCTCCGGATACAAACATCTACTTGTGATGTTTCCAGTGCATTTGTGGACCGAAACAGACTGAAATATTGCAACGATACACTAAATTAAACctggaataaatatattatataatatattggatctttttagaatttaaaaatgagcaaagaactctttttagcaaaataagagGATGCTCAAATTTTCCATATTTCTGCATATTTCAATTATTGCGAAgtaaaaaagtcatttataGCCGTTTCTCGTGAAAATAATTCACTGTGGACAAACTTACACACCCAGATTCTTTGATTCAGTGGTGGTTTAGGAACCAGGGGTTGTGATATTGTAAATAATGGCATTTTTGTGACATATTTGCTCCCCAATAACCATCAATGAACTTG

Function

symbol description
avpr2 Enables vasopressin receptor activity. Involved in negative regulation of cell population proliferation. Located in cytoplasmic vesicle; perinuclear region of cytoplasm; and plasma membrane. Implicated in nephrogenic diabetes insipidus and nephrogenic syndrome of inappropriate antidiuresis.

NR:

description
arginine vasotocin receptor V2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677186.1 True 2672 mRNA 0.52 7 11708353 11742030

Neighbor

gene id symbol gene type direction distance location
LOC103033368 LOC108425561,LOC108276129,LOC107593912,LOC107673097,LOC107737522,LOC107591068,LOC107716150 coding upstream 42419 11651509 ~ 11665934 (+)
LOC103032800 lrp1,LOC108425568,LOC107593902,LOC107673053 coding upstream 345002 11185748 ~ 11363351 (+)
LOC103046525 LOC108425571 coding upstream 580433 11115529 ~ 11127920 (+)
fitm2 NA coding upstream 594389 11110370 ~ 11113964 (+)
ada ada coding upstream 718853 10969289 ~ 10989500 (+)
LOC103045529 LOC108425554 coding downstream 64770 11806800 ~ 11909123 (+)
LOC103036846 LOC103036846,LOC108425493 coding downstream 226751 11968781 ~ 11970846 (+)
LOC103037687 NA coding downstream 250212 11992242 ~ 11994812 (+)
LOC111194087 LOC108275500,LOC108425482 coding downstream 254076 11996106 ~ 12053107 (+)
cbln4 cbln4,LOC106567122 coding downstream 326822 12068852 ~ 12086229 (+)
G131361 NA non-coding upstream 28524 11676379 ~ 11679829 (+)
G131357 NA non-coding upstream 61248 11646460 ~ 11647105 (+)
G131351 NA non-coding upstream 73116 11632509 ~ 11635237 (+)
G131350 NA non-coding upstream 77534 11630032 ~ 11630819 (+)
G131340 NA non-coding upstream 130071 11575393 ~ 11578282 (+)
G131370 NA non-coding downstream 12535 11754565 ~ 11755732 (+)
G131380 NA non-coding downstream 42577 11784607 ~ 11793086 (+)
G131531 NA non-coding downstream 307316 12049346 ~ 12050371 (+)
G131527 NA non-coding downstream 345123 12087153 ~ 12090116 (+)
G131595 NA non-coding downstream 639585 12381615 ~ 12413992 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other upstream 205630 11491563 ~ 11502723 (+)
LOC107197146 NA other upstream 878795 10815860 ~ 10829558 (+)
LOC103038829 NA other upstream 1780120 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 1787358 9911307 ~ 9920995 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other upstream 1836581 9856406 ~ 9871772 (+)
LOC111194085 LOC108425553 other downstream 180310 11922340 ~ 11978761 (+)
LOC103031050 NA other downstream 498666 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 947124 12689154 ~ 12763710 (+)
G131677 NA other downstream 1171461 12913491 ~ 12940847 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other downstream 3425978 15168008 ~ 15172897 (+)

Expression


Co-expression Network