G131531


Basic Information

Item Value
gene id G131531
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 12049346 ~ 12050371 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU177922
TCATGCTCTCTTCCATAATGCCACGAAGAAAAAggacagacaggcagagaaCAGTCCTTTTTCCCCTCTCAGCCTGTAATGTACATCTCCCCAACCGTCCCAATTTCCTCCAGGACTATCCATCATCTCTAAAAGTGTTATTGGTCTTCTGTGAGAGTTTGGCCTGGTGAAAGTGTGACAGTGGTGAGAGGAGAGAGTCGGTAGCCGGGGAAAAGGAATTGCTTTAGTTCCACAATTACAGCCCAAACTTTAGGCCCACAGCACCAATAAAGAGAAGCAGCTCGGgtcaggaggagagagagagagagagagagagagagagggagagagagagagagaggccgaGTGAAAGATATAGAGGCCCAGCGAGAaatagaggcagagagagagaaagacagaccgAGAATTGAGCATCAGTGAATGAGGTTGGGGTGTTGGGAGgacgagcgagagagaaagagaggaacagaaagagagaaagagacagagaaagaaaaagagaggcatagcaagagaaagagaggcagaacAAGAGAtggagaggcagagagagagagagagagaggcagagaattGAGAATCAGGACTGAATTAGGTTGGGGTGttgggaggaagagagaaagagagagggatgagagga

Function

GO:

id name namespace
GO:0036344 platelet morphogenesis biological_process
GO:0030220 platelet formation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177922 True 640 lncRNA 0.49 2 12049346 12050371

Neighbor

gene id symbol gene type direction distance location
LOC103037687 NA coding upstream 54534 11992242 ~ 11994812 (+)
LOC103036846 LOC103036846,LOC108425493 coding upstream 78500 11968781 ~ 11970846 (+)
LOC103045529 LOC108425554 coding upstream 140223 11806800 ~ 11909123 (+)
LOC103033689 avpr2,LOC106567019 coding upstream 307316 11708353 ~ 11742030 (+)
LOC103033368 LOC108425561,LOC108276129,LOC107593912,LOC107673097,LOC107737522,LOC107591068,LOC107716150 coding upstream 383412 11651509 ~ 11665934 (+)
cbln4 cbln4,LOC106567122 coding downstream 18481 12068852 ~ 12086229 (+)
znf217 NA coding downstream 249663 12300034 ~ 12317378 (+)
zfp64 NA coding downstream 621256 12671627 ~ 12678080 (+)
atp9a atp9a,LOC106567116 coding downstream 714940 12765311 ~ 12823977 (+)
nfatc2 nfatc2 coding downstream 791832 12842203 ~ 12898436 (+)
G131380 NA non-coding upstream 256260 11784607 ~ 11793086 (+)
G131367 NA non-coding upstream 259089 11719732 ~ 11790257 (+)
G131370 NA non-coding upstream 293614 11754565 ~ 11755732 (+)
G131361 NA non-coding upstream 369517 11676379 ~ 11679829 (+)
G131357 NA non-coding upstream 402241 11646460 ~ 11647105 (+)
G131527 NA non-coding downstream 36782 12087153 ~ 12090116 (+)
G131595 NA non-coding downstream 331244 12381615 ~ 12413992 (+)
G131645 NA non-coding downstream 537924 12588295 ~ 12592758 (+)
G131652 NA non-coding downstream 577361 12627732 ~ 12628616 (+)
G131675 NA non-coding downstream 848122 12898493 ~ 12900454 (+)
LOC111194085 LOC108425553 other upstream 70585 11922340 ~ 11978761 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other upstream 546623 11491563 ~ 11502723 (+)
LOC107197146 NA other upstream 1219788 10815860 ~ 10829558 (+)
LOC103038829 NA other upstream 2121113 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 2128351 9911307 ~ 9920995 (+)
LOC103031050 NA other downstream 190325 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 638783 12689154 ~ 12763710 (+)
G131677 NA other downstream 863120 12913491 ~ 12940847 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other downstream 3117637 15168008 ~ 15172897 (+)
G132146 LOC106581475 other downstream 3189709 15240080 ~ 15240397 (+)

Expression


Co-expression Network