G131086


Basic Information

Item Value
gene id G131086
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 11074489 ~ 11075514 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU177300
tggtgctaggtggttgctagggtgttgctaggcggttgctaaggtgttgctatggtatccggggtggttgctatggtgtttctaggtggttgctaggtgatttATATGcataaattagattaaatgGTGTTTGCACGTTGCTACGCAACGTGCAAATACATCAATCAGCTATGCACGCTAGGTTGCTCTGGCCGTtcgggggtgtccaaacttttgacccgtggctccattacacacagtactggggggccggggtgtccaaacttttgacccgtggctccattacacacagtactggggggccggggtgtccaaacttttgacccgtggctccattacacacagtactggggggccggggtgtccaaacttttgacctaatgctgttttatcccatagctgctccatacactcacagtactggagttCTAGCTACCTGTCCTTCGATCTAGCTGCCGTCCTCCGATTGGCCCCATTCATTCCAATGGGGCCACTTCGTACGACATTCGTACGAAATCCGTACGTCGTAACTTTTCGTAACGCATATTTTCGGAAAGagctcaataagttctacaggtCCTCAATTGGTTTCATCTTCGTATTTCAAAAATTGCGACGTCCACGGGCGTGCAAAGTTctgcccattcattttcaatggtcAAAAAAACGCGTacttacgaagtttttacgaaaaacgtaagtccgatcggaaagctgtatacaagcccaCCATTCCCGATATGGACGCacgttttctcttttgaacGAAGTCGATATTTCGAAAACTGCGGCACTAGTTAACCGgacaaaaaacaggtggaataataataataataataataataataataataataataataataagaataataataataataataataataataataataataataataataataataataataataataataataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177300 True 940 lncRNA 0.42 2 11074489 11075514

Neighbor

gene id symbol gene type direction distance location
ada ada coding upstream 84989 10969289 ~ 10989500 (+)
LOC103044697 gdi1,LOC108276388,LOC108425579,LOC107564645 coding upstream 187403 10874498 ~ 10887086 (+)
LOC103041826 NA coding upstream 215692 10839043 ~ 10858797 (+)
LOC103021375 LOC108441398,LOC107570136,LOC107668555,LOC107716162,LOC107564641,LOC107695834,LOC107737499 coding upstream 313423 10749637 ~ 10761066 (+)
magi3 magi3 coding upstream 331785 10535483 ~ 10742704 (+)
fitm2 NA coding downstream 34856 11110370 ~ 11113964 (+)
LOC103046525 LOC108425571 coding downstream 40015 11115529 ~ 11127920 (+)
LOC103032800 lrp1,LOC108425568,LOC107593902,LOC107673053 coding downstream 110234 11185748 ~ 11363351 (+)
LOC103033368 LOC108425561,LOC108276129,LOC107593912,LOC107673097,LOC107737522,LOC107591068,LOC107716150 coding downstream 575995 11651509 ~ 11665934 (+)
LOC103033689 avpr2,LOC106567019 coding downstream 632839 11708353 ~ 11742030 (+)
G131099 NA non-coding upstream 5279 11061853 ~ 11069210 (+)
G131094 NA non-coding upstream 27629 11040923 ~ 11046860 (+)
G131088 NA non-coding upstream 46513 10995674 ~ 11027976 (+)
G131085 NA non-coding upstream 80343 10991903 ~ 10994146 (+)
G131073 NA non-coding upstream 141563 10930721 ~ 10932926 (+)
G131299 NA non-coding downstream 360283 11435797 ~ 11485646 (+)
G131315 NA non-coding downstream 429815 11505329 ~ 11508938 (+)
LOC111194082 NA non-coding downstream 438677 11514191 ~ 11516304 (+)
G131325 NA non-coding downstream 459543 11535057 ~ 11589420 (+)
G131329 NA non-coding downstream 477399 11552913 ~ 11555625 (+)
LOC107197146 NA other upstream 244931 10815860 ~ 10829558 (+)
LOC103038829 NA other upstream 1146256 9922981 ~ 9928233 (+)
mlh3 mlh3,LOC107591079 other upstream 1153494 9911307 ~ 9920995 (+)
LOC111194075 tuba1b,LOC107697946,LOC103148207,LOC105941124,LOC107707017,LOC107715008,LOC107557552 other upstream 1202717 9856406 ~ 9871772 (+)
G130844 NA other upstream 1317138 9756952 ~ 9757351 (+)
G131313 LOC107737517,LOC107716155,LOC107593906,LOC107668344,LOC107591063 other downstream 416049 11491563 ~ 11502723 (+)
LOC111194085 LOC108425553 other downstream 846826 11922340 ~ 11978761 (+)
LOC103031050 NA other downstream 1165182 12240696 ~ 12334090 (+)
sall4 sall4 other downstream 1613640 12689154 ~ 12763710 (+)
G131677 NA other downstream 1837977 12913491 ~ 12940847 (+)

Expression


Co-expression Network