G163231


Basic Information

Item Value
gene id G163231
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37906862 ~ 37907109 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU221080
gcgaaataaataaataatttattaaataaataacaaagaaacaagtaaacacgtatcaaagataataaaccaaaacaaacgagaggaactagtgaacataaactaaacaaacaagaagtactaaatatatatataaacagggagtaaataaacaaagaataaccaaaaaccaataaccaaaataaacagtgaaacaaaataacataaacctaaacaaacaagagatacaagAAATAGACTAACAGGGC

Function

GO: NA

KEGG:

id description
ko00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin

RNA

RNA id representative length rna type GC content exon number start site end site
TU221080 True 248 lncRNA 0.25 1 37906862 37907109

Neighbor

gene id symbol gene type direction distance location
LOC103044212 kpyk,LOC103044212,LOC108432067,LOC107712845,LOC108264538,LOC106587214,LOC107665073,LOC107595343 coding downstream 463902 37409987 ~ 37442960 (-)
fam214a fam214a coding downstream 1583779 36260915 ~ 36323083 (-)
pigb pigb coding downstream 1724595 36170644 ~ 36182267 (-)
sdr42e1 sdr42e1 coding downstream 1924794 35976180 ~ 35982068 (-)
wtip wtip,LOC107600421,LOC107594378 coding downstream 1936355 35925563 ~ 35970507 (-)
LOC103042980 LOC108432642,LOC102311314,LOC102789927,LOC106562120,LOC101080058,LOC103046663 coding upstream 57222 37964331 ~ 37976276 (-)
LOC103023582 chst1,LOC108432931 coding upstream 761604 38668713 ~ 38671899 (-)
LOC111194821 LOC108411626 coding upstream 918214 38825323 ~ 38835978 (-)
LOC103036953 NA coding upstream 1242934 39150043 ~ 39171591 (-)
pstpip1 LOC108435346 coding upstream 1285202 39192311 ~ 39234568 (-)
G163225 NA non-coding downstream 39270 37828483 ~ 37867592 (-)
G163215 NA non-coding downstream 261288 37645037 ~ 37645574 (-)
G163142 NA non-coding downstream 456205 37450087 ~ 37450657 (-)
G163129 NA non-coding downstream 480140 37396062 ~ 37426722 (-)
G163090 NA non-coding downstream 534922 37366120 ~ 37371940 (-)
G163235 NA non-coding upstream 18622 37925731 ~ 37926299 (-)
G163240 NA non-coding upstream 56406 37963515 ~ 37963727 (-)
G163266 NA non-coding upstream 686768 38593877 ~ 38594151 (-)
G163303 NA non-coding upstream 700324 38607433 ~ 38655295 (-)
G163328 NA non-coding upstream 755714 38662823 ~ 38731381 (-)
G163230 NA other downstream 27447 37878815 ~ 37879415 (-)
onecut1 onecut1 other downstream 1552161 36339380 ~ 36354701 (-)
c18h15orf65 NA other downstream 1765965 36138903 ~ 36140897 (-)
LOC103026784 thsd7a other downstream 3175790 34400663 ~ 34731072 (-)
LOC103042403 slc25a32,LOC102777849,LOC107756894,LOC107726671,LOC107688281 other downstream 3791460 34097928 ~ 34115402 (-)
LOC111194721 NA other upstream 73987 37981096 ~ 38024333 (-)
G163591 NA other upstream 1520739 39427848 ~ 39428541 (-)
G163627 LOC108443054,LOC108263931,LOC108265089 other upstream 1583673 39490782 ~ 39493278 (-)
LOC111194826 NA other upstream 1917554 39824663 ~ 39828074 (-)
G163831 NA other upstream 2535252 40442361 ~ 40446071 (-)

Expression


Co-expression Network