G187156


Basic Information

Item Value
gene id G187156
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 3749815 ~ 3755677 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU253781
tggaAACACATGTTTCTGAGATATGCTGCTTGGTGGTGTAATTACTGCACAGTGGTGTAGAGTTTAGACTTGTCTGGTTGAAGTTTCTTGTagacagattctcctgatccagctgagctgtggatctctgcagctcctccagagtgaccatgggcaccttggctgcttctctgacctgTGCTGGACCATGGcaatgtcttggtaggtttgtagaatcagttgtagaatactttttcagGTTCATTTTTTGAATGATGGATTGAGGATCAATACTCTttgggatgcttaaagcttgagatatgttttttataacataaccctgctttaaacttcttctccacaactttatctctgacctgtctggtgagtccCTTGGTCTTCAtgttgctgtttgttcactagtgttctctaacaatccactgaggccttcagagaacagctgtatttatactgagaatTACCTTCACAATGACGTGCTTCTTTGTGtgggtctatcacttaaaatctaaataaaatccatttaaatttgtggttgtaaggtgacaaaacgTAAAAGATGGGGAAAGCCTCTGTAATAATGGATTGAGACATTAGTTTAATCATTTGTAATGatgtcataagtactgttaacTGATTTACtcttattgtaaagttttaCTCATGTGGGAGTCCTGACGCTTGGATGTTCTTGGGCAGAACGAACAGCTAGTGTGAGGAATGCTCTTTTCTGGAGTGTCCAATGGTGAGGAGTATTTGTCCTATTCAACCACTCAGATGATGATCCCGGTTCCCAGTTTGTACCCGTTAAtcagaagaataaaaaatggTCTTTGTGGAAATTGGTAATTGCAAaaaagatagatatataaaaagattataaaaaacatatccTTGATCCCTTAACTATAAAATATTGTcggtttataattttttttttttcattgtattttcttttaggTTAGACCATGGTTGTCTTCCTAGATCAAGAAAAAATTACGACTATTTGGGCTTCTTTGTGGATTCTTTCACCACTGTTGTAACATCGGTGTAGGTCACGCCCTTGTAGATTCCCTTAGTAGGATACTCTAAAGTTGAGCCATTGCTGCAGGTAATTTGGACAGTGGCGGTGTAGGGGAGATCAAATGTGGCTCGACCGATTGTGATGTCTACATCCATGGATTTCTTTGGAGGAACCTGAACAGGGAAAGACAGCAGCTCGGTTTTCTCCTCAGAATTCTCCAAACCATATGAGCTTTCAGTACTCAGGGTAAAACTGAATCCAGTTGATACTTCCACAACATCTGGAATTCCTGCCTTCACTTCCATGTGGAAAGACATTTCCATCTTGTTGGTTGTTGACCAGGAGGACTTTTTGGTGATCTTCTTTGAAGTTTCTACTTTGTATTCTTGTTGGACATCAGATGTGTTGTGGTAAGTTATGGATTTGATTTCTTCGACAACTACCTTGGGTATCTCCATGTGCAGTGTGGGATAATTCACATTCTTCATCACAGTAGACTCGATGCTGTTGATGAATACGAAAGATAAGCAATCGATATCTGACCCACATCTTCCAGAAATTCCCATACAGATCCCAGAACCAACATCTATTGGGTATTCTGTCTTCAGGCCCCACTCTGTCATCTGTACAAAGAACTCTCGAGATTTGTTGGTCCTGAATTTGATGGCACCTGTACGTGTTCCAGCTCCATTTCcccagagcgagagagaggtaAAAAACTCTCCATCTTCAAATATAAATTGTTTGGGATTTCCACTGGGGTTTCCAAACTGCTCGGAGCGGCCATCGGTAAGCCAGGCCTTAATGGCTTTGATCTGCCAGCCACCAACCCACACCCATATCTGTTTCAGTGTGGCTCCATTGCCAAGCCCATTAAAATCAAATGCATGACCTCCACTTCCACCGATGTATTCCCTCAGGTATGACATATTGTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253781 True 1958 TUCP 0.41 3 3749815 3755677

Neighbor

gene id symbol gene type direction distance location
LOC111195352 NA coding downstream 5802 3742952 ~ 3744013 (-)
dnase1l3 dnase1l3 coding downstream 43469 3699756 ~ 3706346 (-)
dennd6a dennd6a,LOC107657973,LOC107680547 coding downstream 276726 3447309 ~ 3473089 (-)
LOC103029097 arf4a,LOC108431611,LOC107680528,LOC107747489,LOC107597170,LOC108254969,LOC107599973 coding downstream 320128 3422321 ~ 3429687 (-)
rps23 rps23,rs23,LOC106566095 coding downstream 354906 3392394 ~ 3394909 (-)
LOC103033529 LOC108431592,LOC108431591 coding upstream 39475 3795152 ~ 3796296 (-)
aldh4a1 aldh4a1,LOC106582961 coding upstream 53612 3809289 ~ 3821888 (-)
LOC103032581 iffo2,LOC108254735 coding upstream 75251 3830928 ~ 3877313 (-)
LOC111195357 LOC107706545 coding upstream 136844 3892521 ~ 3902031 (-)
LOC103031836 akr7a3,LOC108431624,LOC108255199,LOC108431625,LOC107385281,LOC103363212 coding upstream 146715 3902392 ~ 3907278 (-)
G187152 NA non-coding downstream 13882 3732364 ~ 3735933 (-)
G187143 NA non-coding downstream 19691 3721944 ~ 3730124 (-)
G187144 abhd6,abhd6a,LOC107657977,LOC107557412,LOC107701976 non-coding downstream 33261 3708912 ~ 3716554 (-)
G187127 NA non-coding downstream 50459 3698293 ~ 3699356 (-)
G187132 NA non-coding downstream 87631 3661430 ~ 3662184 (-)
G187155 NA non-coding upstream 1692 3757369 ~ 3784341 (-)
G187166 NA non-coding upstream 124212 3879889 ~ 3882633 (-)
G187167 NA non-coding upstream 127180 3882857 ~ 3883115 (-)
G187168 NA non-coding upstream 129227 3884904 ~ 3887048 (-)
G187172 NA non-coding upstream 186819 3942496 ~ 4028558 (-)
G186673 NA other downstream 2359328 1389924 ~ 1390487 (-)
tma7 NA other downstream 3168277 487081 ~ 581538 (-)
LOC103045965 NA other downstream 3209026 539042 ~ 540789 (-)
G186495 smarcd1,LOC107698569 other downstream 3217813 475441 ~ 532002 (-)
G186501 gpd1,gpd1b,LOC107566434,LOC107727040,LOC107721242,LOC107698578 other downstream 3248561 499989 ~ 501254 (-)
G187154 NA other upstream 10186 3765863 ~ 3774843 (-)
LOC107197677 NA other upstream 22337 3778014 ~ 3779720 (-)
LOC103030666 kcnab2a,LOC108431628,LOC107712982,LOC107657983,LOC107582417,LOC107592856,LOC108255041,LOC103385628,LOC101463812,LOC108231619,LOC107385277,LOC106513833,LOC100709904 other upstream 215257 3970934 ~ 4160954 (-)
vamp3 vamp3,LOC107582408,LOC107751179 other upstream 1218551 4974228 ~ 4989258 (-)
phf13 phf13 other upstream 1737735 5493412 ~ 5505747 (-)

Expression


Co-expression Network