dstyk (dstyk)


Basic Information

Item Value
gene id dstyk
gene name dstyk
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 17883060 ~ 17928657 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682514.1
GCACCGCGCAGGCCCAGCCTTCAAAACATCGCCAGTGGCAGCAGCGCGGCGGCTGGGCAGCGCTTCTCCGCCTCCCTGATTTTAGGGTTTGCAGTGATTAGGACAGCATGTCCCGCTGTATTTAGGCCCGGTCCGGGTCCGCTTACACTCCAGCTCGGTCCGGCGGGGTCCAGAGCGGCGGCTGAACCCGCAAACTCCGCGCCGCGGGAGGAGGAAAGTTGCCCGGCTTGGAAAAAGCTGCATCCCGGGAGCTCGCGGACTGTGCTCGAACTAACCTCCAGCGGATGGGCGGCTCGCCGGCTAAAACTGTCCGcttctttttctgcttttttgggGGGTTGATGAGCTCGGACCCGCTGCGGGAGCTCGAATTATCCtgtatattagtttattagacgGTTCTGCTGAGAGCTGGAGTGCTGTCTCACTTCTTGTTGTTTTGGTTGTTGCAGGAACTTTGGCtaaagctagcttagctttgccTGCAAAGTTTCTGGAATTTGTAGTTTTTGCGTTTCCAGGCTTTGAGGCTTTGGGGCATTGGTTGTATATagagtgtatgtgtatattttgtCTGAGATTGTTTCTagcctccttttttttttttttttttttttttttttttttaccagcctctccctctctttcgcTTATGCCAAAAATACCTTTGTCAAGTCAAGTGATCCTCTAATCCGGGCCTGCTCTGCTTTTTTCCTTTGCTTTTCCCTGATATGCACTGGAAACAAAGCTAGCTAAATCCAGGCTGCAGATTCTTACTTAAAAAtcttactttaaaatatttaaaataactttacatttggATTTCTGGACATTTGCAAGAGTTTGCAAATGCAAAATCACCTCCATCACCAGCAGTTAAAGCTAGTTTGAGTGTAAATGTGATGGAGAAGTAGGCCAGCCTGCTTTGGGAAAGCTTCTCTCCTGACTTTGGTGCTTAATTTAGTTCTTTACACAATTATGGAGGTTCTAATATAGAACATTGGCAACAACTCACAATTCAcactacatatatacacacatatatctatacagtcagtcagtcagactGTGGGTGTGTATGGTCCAGTAAAGCTAGAGCTGTATTAATGTCCTGTATGTTTATGTGATCCATTCACTCactgtccaaaaacatggagccCAGTGGTCCTCAGAGATCTTCTCCTCTGGCCCGCGAGCTCACACGGGTCTTCGCCAACTATAATAAGCATGCAACCCAGCTGAGGAGGAACCTGAAGGAGACTGAAGCTTTCTTCAGAGAGATGAGACACAACTACAGCAATGCACGAGCTTCAGCATCATCCCCCACTGCAGCACTGGAAGCAGgtcCACTCAGCTGTATCTCCTTCCCACGGCAGGAGGAGGAGTACCTGCACAGCATTGTGGGTAGTGTGCCCTACATCCTAGTACTTGGACAGGATTGCCCCGTCCGCTATCAGCTCCTGAACTGCATGTTAGGCGAGAGGCTCCTCCCCCTAGGCCCTGAGCTGGGCGGGCCCTGTGGACCAGAGGGCGGGGCCTGTAAGAGGAGGAAGCTATGTTTCACACACGGCCGGCAGACGCGGCTCAGCCTGGCGCTGCCCGGGCAGTACGAGCTCGTTCACCAGCTGGCGGCGCACTGCGGCCGCTGGGACACCGTACCCCGGCAGGACCTGGAGATCCAGGAGGAGTGCGAGGATCCTGCTCACCGATTGGCTGAGCTGGAGATAACGCTGCATCACCCGCTACTGCAGGAGGCTAAGATCATGGTGGTTCCGTGTGCCGGAGTTCAGCCAATAGAGCAAGTGTTGGCTGAGTGCACGAGCAAAACCCTTCCCATCATCCTCTACGCCCTCAGTCAGGACTCTGTAACCCCAGAGCAGGCGGCGGCTCTTCACAAGGTTCACGAGGCTCTTCCGTACCCGGTGTGCTTCGTCCGGGTTTCCTCTCCGGGAGATTCTGGATCTTCTGACCGCGGGTCTCTGCACAAACAGCTGGCCGCCCTCAGTCTCCTCTCCAGCAGCTCGGGGAACTGTTCCTGCGGCGCTCCCTCACAGACCCACGGAGCCGGGAAACCCCAGAGCGTTCTGGGAGAGAGTCTGGAGCGCCTCCATCGCCTGCTGGTTCCCTTCGCTCGACAGGTTCTCACTGGCCAGCAGGTGGAGGCAGCCAACCGCCTCAACGCCCTGCACTGCCGCTGCCTCGACCTCTTCATCAACCAGgcTTTTGATATGCAGAGGGATCTGCAGATAACCCCTCGGAGGCTGGAGTACACGcgggagaaagagagcgagcTGTTCGCCTCCCTCATGGCCATCGCCAACCGCAAGCAGGaggagatgaaggagatgattgtggagaCGCTGAGCACCATGAAGGAGCAGCTGCTGGAGGACGCAGCCAACCTTGAGTTCACAGATATTATAGTGACCCCTAATGGAGAGCCGGTCACCACTAAGGAGATAAAGTCGTGTATCCAGCAGATCCAGGAGCTGATCGTGGTTCGGCTGAATCAGGCCGTAGCCAATAAGCTAATCAGTTCGGTGGACTACCTGAGGGAGAGCTTCGTGGGAACGCTGGAGAGATGCCTCAGCAGTTTGGAGAAATCCACCACGGACTCCTCCGTTCATAACGTCACCTCCAACCACCTTAAACAGATCCTGAACGCTGCGTATCACGTGGAGGTGACGTTCCACTCGGGATCATCTGTTACACGACTGGTCTGGGAGCAGATCAAACAGATCATCCAGAGGCTGACGTGGGTTAATCCTCCAGCTATAACTCCAGAGTGGAAGAGGAAAGTGGCTCAGGACGCCATCGAGAGTCTGAGTGCAGCAAAACTGGCCAAAAGTATCTGCTCTCAGTTCCGCACCCGACTCAACAGCTCTCACGACGCCTTCGCTGCCTCTCTACGCCAGttggaGGAGGGTCACACAGGTCGTTTGGAGAGGACGGAGGATCTGTGGCTGCGAGTGAGGAAAGACCACGCCCCCCGACTCGCACGACTATCACTAGAGAGCAGATCTCTCAGAGACGTCCTGCTGTATggTAAGCCGAAGCTGGGTCGGGAGCTGGGCCGGGGGCAGTATGGAGTGGTGTATTTATGTGATAAATGGGGAGAGCAAAACCCCTGCGCACTAAAATCAGTCGTCCCTCCCGACGATAAACACTGGAACGACTTGGCGCTGGAGTTCCACTACACacgTTCTCTGCCGAAGCACGAGCGGCTGGTGAATCTTCACGGCTCTGTTATTGATCACACGTACGGGGGGGGCTCCAGTATAGCGGTGCTGCTGATTATGGAGAGACTGCACAGAGACCTGTACACAGGCCtgaagGCTGGTCTCTCTCTGAAGGAGCGTCTGCAGATCGCGCTGGACGTGGTGGAGGGGATTCGCTTCCTGCACGGTCAGGGGCTCCTGCACCGAGACATCAAACTAAAAAACGTCCTGctgGATAAGCAGAACCGAGCGAAGATCACAGACCTGGGTTTCTGTAAACCTGAGGCCATGATGTCCGGCAGCATCGTAGGAACACCGATACACATGGCCCCAGAACTGTTTACAGgaaaGTATGATAACTCGGTGGATGTGTACGCGTTTGGGATCCTGTTCTGGTATCTCTGTACTGGATCTGTTAAACTGCCTGAAGCTTTTGAGAAATGCTCCAGTAAAGACCAGCTGTGGACCAACGTTAAGAGAGgtTCTCGGCCGGAGCGTTTGCCCACGTTTGATGAAGAGTGCTGGCAGCTGATGGAAGCCTGCTGGAACGGAGATCCTCTCCAGAGACCTCTGCTGGGGATCGTTCAGCCCAGCCTGCAAAGCATCATGGTCCGGATGTGTGACGGCACGGACCGCAAGAGCGCCAGCCTCGAGGACTcgaactaacacacacacacttccatacACTCCCATAGGAAAACGATCAAAAGACAATAAAGATAACGATGAAGATgatgttaatgtaaaaaaaagaaaagaaagaaaaacgtgtgtttttgtattttgggctcagagagagaaaacgtaGCGAGGAACGAGCTCCAACCTCCTGTTAGGATCCTGATACACTATTTATGATCTGAGCAGTATAAATTCAGAATGTGCACGTAAgtatgtctgtgtttgtgttgcttCTGTATTTATATAAAGTCACTCTGCACACTATGCCCTACTGAGCATGCATGCTAATTGCTGCTTCGTTGTAGGATTGTTTCTAGATGTGAGGAGTTTTAAGAGTAGTTTGGTTTttgcagtattaaaaaaaagacttaaatttTAGACGGTGTTTAAACTGGTTTATCAATATTATGAGATGacgttttgtttttgttttttaataaaaaaaaaaagattttgagaaactattttgtgctttttgtagCTTTTGTGATGGATTGAAAGCCGGTTTACACtgccatgccaaaagtcatgggatagcagtcaTTGGACACCttagcaatattttttattagactTGTTGGttgttttaaatacttaaacataaatatagGCCAACGTATGTTAGCAGAGGCAGCAGAAATGAGTGAAAAGCTGTGAAATTCCTCAGGGTTCAGTGAGCTGGTGGAGTGAAAGTGAGTCAGAGCTGGTCTGGAGTGGAAAGAAGAAAAGCTCTGTAGATTAAAA

Function

symbol description
dstyk Predicted to enable ATP binding activity and protein kinase activity. Involved in embryonic organ development. Acts upstream of or within notochord cell vacuolation. Predicted to be located in several cellular components, including apical plasma membrane; basolateral plasma membrane; and cell junction. Is expressed in notochord. Human ortholog(s) of this gene implicated in CAKUT1 and hereditary spastic paraplegia 23. Orthologous to human DSTYK (dual serine/threonine and tyrosine protein kinase).

NR:

description
dual serine/threonine and tyrosine protein kinase-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K16288 DSTYK, RIPK5; dual serine/threonine and tyrosine protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682514.1 True 4643 mRNA 0.51 14 17883060 17928657

Neighbor

gene id symbol gene type direction distance location
ccnd3 NA coding upstream 28093 17848593 ~ 17854967 (+)
bysl bysl,LOC102787510 coding upstream 36683 17837190 ~ 17846377 (+)
LOC103033239 tmcc2,LOC107569750,LOC107690538,LOC107656904 coding upstream 81556 17797601 ~ 17801504 (+)
srsf3 srsf3,srsf3b,LOC108413700,LOC107569752,LOC107690536 coding upstream 116197 17755944 ~ 17766863 (+)
LOC103033562 LOC108412444 coding upstream 133742 17738487 ~ 17749318 (+)
LOC103045175 NA coding downstream 113970 18042627 ~ 18054322 (+)
LOC111195431 NA coding downstream 123356 18052013 ~ 18052980 (+)
nbl1 nbl1,LOC108415674,LOC106583098 coding downstream 128853 18057510 ~ 18068394 (+)
tmem88b LOC108415445 coding downstream 151563 18080220 ~ 18092648 (+)
vwa1 NA coding downstream 196801 18125458 ~ 18141915 (+)
G190636 med20,LOC102787816 non-coding upstream 46651 17831881 ~ 17836409 (+)
G190613 NA non-coding upstream 166227 17691046 ~ 17716833 (+)
G190600 NA non-coding upstream 181229 17664233 ~ 17701831 (+)
G190568 NA non-coding upstream 229074 17645844 ~ 17653986 (+)
G190572 NA non-coding upstream 230970 17619924 ~ 17652090 (+)
G190659 NA non-coding downstream 35028 17963685 ~ 17987677 (+)
G190662 NA non-coding downstream 45874 17974531 ~ 18071646 (+)
G190667 NA non-coding downstream 113994 18042651 ~ 18055449 (+)
G190669 NA non-coding downstream 131328 18059985 ~ 18060748 (+)
G190693 NA non-coding downstream 226748 18155405 ~ 18172697 (+)
cdkn1a NA other upstream 85758 17688517 ~ 17797302 (+)
LOC103024479 LOC108413015 other upstream 369751 17508390 ~ 17513309 (+)
G190550 NA other upstream 389878 17483820 ~ 17493182 (+)
cept1 cept1,LOC103025726,LOC108413012 other upstream 436319 17434362 ~ 17446741 (+)
G190484 irf6,LOC106565674 other upstream 697932 17181122 ~ 17185128 (+)
G190661 capzb,LOC105897928,LOC106565651,LOC106583096 other downstream 93595 18022252 ~ 18041509 (+)
tmem43 NA other downstream 541940 18470597 ~ 18482916 (+)
LOC103030382 LOC108444095 other downstream 624197 18552854 ~ 18672404 (+)
G191033 myhb,LOC108261437,LOC108444092,LOC108261508,LOC108254800,LOC106527107,LOC108443907,LOC108443910,LOC108444093 other downstream 769940 18698597 ~ 18722747 (+)
LOC103037762 erc2,LOC108414413,LOC107694874 other downstream 1176832 19105489 ~ 19206958 (+)

Expression


Co-expression Network