cept1 (cept1,LOC103025726,LOC108413012)


Basic Information

Item Value
gene id cept1
gene name cept1,LOC103025726,LOC108413012
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 17434362 ~ 17446741 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU258364
TTTGAGGCTGAACTGCGACGCAACGACCGGCGAGTTTTACGtaccgagtgtgtgtgtgtgcgcgtgagtgtgtgtgtgagagagtgtgtgtgtgtgtgtggtactgaCCCAAAGATCAGTGTGTTTAGGGGCTTCTGAGCTTTACCCAGCTGTGGGTCCAACAGCACCTGAGTGTGTGTAGCTCCGCAACCGGAACCAGCGCTGCGTCTACAGCAGCTAGGAGAGTGTGTGGGGAGGAGGCCCAGGTGTGCACCTCAGAACTGGGAGAACAGgtgtAGCACGGCCGCAGTGTGGGTGAGCGGCTGTCGGAGGCAGGTCGGGGTG
>XM_007256724.3
CCTAGAAGCTTTTGAGGCTGAACTGCGACGCAACGACCGGCGAGTTTTACGtaccgagtgtgtgtgtgtgcgcgtgagtgtgtgtgtgagagagtgtgtgtgtgtgtgtggtactgaCCCAAAGATCAGTGTGTTTAGGGGCTTCTGAGCTTTACCCAGCTGTGGGTCCAACAGCACCTGAGTGTGTGTAGCTCCGCAACCGGAACCAGCGCTGCGTCTACAGCAGCTAGGAGAGTGTGTGGGGAGGAGGCCCAGGTGTGCACCTCAGAACTGGGAGAACAGgtgtAGCACGGCCGCAGTGTGGGTGAGCGGCTGTCGGAGGCAGGTCGGGGTGCATCGGGGGGGTCATGAGCGGGCAGGCGGGGGTGAAGGGCCGGCGGGGGGTTCGGGGTGAGCAGGGCATGGATTCGTCCTGCTGGCTGTCTCCCGCGGTCCTGCGGCGGCTCATCGAGCTGCCTGCCCCGGTGCTGTCCCGGCACCAGCTGAAGCGACTGGAGGAGCACCGCTACAGCAGCAGCGGCAGATCCCTGCTGGAGCCCATCATGCAGCGCTACTGGGAATGGCTGGTGTGCCGCATGCCCCCCTGGCTCGCTCCCAACCTCATCACCGTCGTCGGCCTGGCAACCAACATCTTTACCACGCTGGTGCTGGTTTACTACTGCCCCACTGCCACCGAACAGgCACCGCTGTGGGCGTACCTGATGTGTGCAGTGGGTCTGTTTGTGTATCAGTCTCTGGACGCCATAGACGGGAAGCAGGCGAGGCGCACTAACAGCAGCTCACCACTGGGGGAGCTGTTTGACCACGGCTGTGATTCGCTTTCCACAGTGTTTGTGGTTCTGGGCACCAGTATTGCGGTTCAGTTGGGGACAAATCCAGACTGGATGTTTTTCTGCTGCTTTGCGGGCATGTTTATGTTCTACTGCGCGCACTGGCAGACGTACGTCTCCGGCACTCTGCGCTTCGGCATcaTTGATGTGACTGAAGTGCAGATCTTCATTATTATCATGTATTTGCTGGCTGCTGTGGGCGGATCGGCTTTCTGGCAGGCTCTGATCCCTGTGTTAAACATCCAGATGAAAATAGTTCCAGCTCTCTGCACGTTCGTAGGCGCGGTGGTCTCCTGTACAGGTTACTTCAGAGTCATTTTTACAGGAGGGGTGGGCAAAAATGGATCCACAATAGCGGGAACAAGTGTGTTATCTCCAGTCCTGCACATAGGCTCTGTTATAGTGCTCGCTATGATGATTTATAAGAAATCTGCTATCCAGCTGTTTGAAAAACACCCCTGTCTTTATATTCTGGCGTTTGGCTTCGTTTCTGCAAAAATAACCAACAAATTAGTGGTTGCACACATGACAAAAAGTGAAATGCATCTTCATGACGTGGCGTTTCTGGGCCCCGggcttctgtttctgaatcagtattTCAACAGTTTTATTGACGAGTACGTGGTGCTCTGGATCGCACTGGTGCTGTCGCTGTTTGACCTGGTGCGCTactgcgtgagtgtgtgtaatcagATCGCGTCACACCTTCATATCTTCGTCTTTAAAATCAAACCTCCGACTATGGGAGCAGCTCAGTAACTCCAAGCGACCGCTGCCACTGACTCTCTGCTctgtatagctgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtttatacgtGTGTTTGCCTGCCTGTCCGTGTCTCACACAGTGTCTGAAGGATGAATCTGATGAAATGAATCAGTGATCTATAGAAGGAGGGATTAGGATGAATTGATGCTGGTGTTGCTGGTGGTGTGAGTGCGTCACTGAGAGCTGATGAAGGCGagtgtttgatttatttaaatgattataattaaaaactaaTGCAATCTGTAAGGAAGTTCGGGTGAATGGCGAATTAACAGGTGCTAATACTCTCCCACTTATTTCTGTCTGATCACTCGTTTAGGTTTCATCTTTTAAATAACAGATAAAGATGAAGAATTTGGTGGGAGTGAGTCTGAATATGCTTCAATCGTTCGTTTGTTTATTCCTGTCACGTTCGTTTTCACAGGCGTTCACTTCTCTCGTTCTCAGTATTGCATGCCTTGTCTTTGTTTATAAAATCCTGCTTATCACAAATCtctcatttaatttaaatgtaaaagaagaACATTTAAGTCATTTACGTGAATAGAGACTTTGGCGTTGTCATgaattgctgctgctgctacaaacatattattattgttattattgttgttgttataattataattattattaaagttgTTTAAATCCTTATTTAGACACATTATGACTGTACTGTACTGGTTTGCTTTGTAGAGATTTAAAATATCTCTGATTTCGCTTCATATTTCTTTAAACTCTCATTGTGTTTctaaaaagaacaagaaagcTTTTTAACTGCTAATCTCTCAATATCCCACTAACCCATCACACCTTAATAACGTCTTACAgtcttaaaaaataagtaatagcTCTTTAAACGTTCTTTGCacagacatacagtaccagtttaaattcagtgtttttccattattttaaattttctgcattttagattaataa
>XM_007256725.3
TCCTAGAAGCTTTTGAGGCTGAACTGCGACGCAACGACCGGCGAGTTTTACGtaccgagtgtgtgtgtgtgcgcgtgagtgtgtgtgtgagagagtgtgtgtgtgtgtgtggtactgaCCCAAAGATCAGTGTGTTTAGGGGCTTCTGAGCTTTACCCAGCTGTGGGTCCAACAGCACCTGAGTGTGTGTAGCTCCGCAACCGGAACCAGCGCTGCGTCTACAGCAGCTAGGAGAGTGTGTGGGGAGGAGGCCCAGGTGTGCACCTCAGAACTGGGAGAACAGgtgtAGCACGGCCGCAGTGTGGGTGAGCGGCTGTCGGAGGCAGGTCGGGGTGCATCGGGGGGGTCATGAGCGGGCAGGCGGGGGTGAAGGGCCGGCGGGGGGTTCGGGGTGAGCAGGGCATGGATTCGTCCTGCTGGCTGTCTCCCGCGGTCCTGCGGCGGCTCATCGAGCTGCCTGCCCCGGTGCTGTCCCGGCACCAGCTGAAGCGACTGGAGGAGCACCGCTACAGCAGCAGCGGCAGATCCCTGCTGGAGCCCATCATGCAGCGCTACTGGGAATGGCTGGTGTGCCGCATGCCCCCCTGGCTCGCTCCCAACCTCATCACCGTCGTCGGCCTGGCAACCAACATCTTTACCACGCTGGTGCTGGTTTACTACTGCCCCACTGCCACCGAACAGgCACCGCTGTGGGCGTACCTGATGTGTGCAGTGGGTCTGTTTGTGTATCAGTCTCTGGACGCCATAGACGGGAAGCAGGCGAGGCGCACTAACAGCAGCTCACCACTGGGGGAGCTGTTTGACCACGGCTGTGATTCGCTTTCCACAGTGTTTGTGGTTCTGGGCACCAGTATTGCGGTTCAGTTGGGGACAAATCCAGACTGGATGTTTTTCTGCTGCTTTGCGGGCATGTTTATGTTCTACTGCGCGCACTGGCAGACGTACGTCTCCGGCACTCTGCGCTTCGGCATACTTGACATCACTGAGGTGCAGCTCAGCCTGGCCCTGCTGCACACCTTCACCGCTAGTGTTGGGCCCAGGTTTTGGAACCTGACGATCCCTGTGTTAAACATCCAGATGAAAATAGTTCCAGCTCTCTGCACGTTCGTAGGCGCGGTGGTCTCCTGTACAGGTTACTTCAGAGTCATTTTTACAGGAGGGGTGGGCAAAAATGGATCCACAATAGCGGGAACAAGTGTGTTATCTCCAGTCCTGCACATAGGCTCTGTTATAGTGCTCGCTATGATGATTTATAAGAAATCTGCTATCCAGCTGTTTGAAAAACACCCCTGTCTTTATATTCTGGCGTTTGGCTTCGTTTCTGCAAAAATAACCAACAAATTAGTGGTTGCACACATGACAAAAAGTGAAATGCATCTTCATGACGTGGCGTTTCTGGGCCCCGggcttctgtttctgaatcagtattTCAACAGTTTTATTGACGAGTACGTGGTGCTCTGGATCGCACTGGTGCTGTCGCTGTTTGACCTGGTGCGCTactgcgtgagtgtgtgtaatcagATCGCGTCACACCTTCATATCTTCGTCTTTAAAATCAAACCTCCGACTATGGGAGCAGCTCAGTAACTCCAAGCGACCGCTGCCACTGACTCTCTGCTctgtatagctgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtttatacgtGTGTTTGCCTGCCTGTCCGTGTCTCACACAGTGTCTGAAGGATGAATCTGATGAAATGAATCAGTGATCTATAGAAGGAGGGATTAGGATGAATTGATGCTGGTGTTGCTGGTGGTGTGAGTGCGTCACTGAGAGCTGATGAAGGCGagtgtttgatttatttaaatgattataattaaaaactaaTGCAATCTGTAAGGAAGTTCGGGTGAATGGCGAATTAACAGGTGCTAATACTCTCCCACTTATTTCTGTCTGATCACTCGTTTAGGTTTCATCTTTTAAATAACAGATAAAGATGAAGAATTTGGTGGGAGTGAGTCTGAATATGCTTCAATCGTTCGTTTGTTTATTCCTGTCACGTTCGTTTTCACAGGCGTTCACTTCTCTCGTTCTCAGTATTGCATGCCTTGTCTTTGTTTATAAAATCCTGCTTATCACAAATCtctcatttaatttaaatgtaaaagaagaACATTTAAGTCATTTACGTGAATAGAGACTTTGGCGTTGTCATgaattgctgctgctgctacaaacatattattattgttattattgttgttgttataattataattattattaaagttgTTTAAATCCTTATTTAGACACATTATGACTGTACTGTACTGGTTTGCTTTGTAGAGATTTAAAATATCTCTGATTTCGCTTCATATTTCTTTAAACTCTCATTGTGTTTctaaaaagaacaagaaagcTTTTTAACTGCTAATCTCTCAATATCCCACTAACCCATCACACCTTAATAACGTCTTACAgtcttaaaaaataagtaatagcTCTTTAAACGTTCTTTGCacagacatacagtaccagtttaaattcagtgtttttccattattttaaattttctgcattttagattaataa
>XM_022682491.1
AGGTTTTCCACACTACTGACAAGCTAGGAGAGTGTGTGGGGAGGAGGCCCAGGTGTGCACCTCAGAACTGGGAGAACAGgtgtAGCACGGCCGCAGTGTGGGTGAGCGGCTGTCGGAGGCAGGTCGGGGTGCATCGGGGGGGTCATGAGCGGGCAGGCGGGGGTGAAGGGCCGGCGGGGGGTTCGGGGTGAGCAGGGCATGGATTCGTCCTGCTGGCTGTCTCCCGCGGTCCTGCGGCGGCTCATCGAGCTGCCTGCCCCGGTGCTGTCCCGGCACCAGCTGAAGCGACTGGAGGAGCACCGCTACAGCAGCAGCGGCAGATCCCTGCTGGAGCCCATCATGCAGCGCTACTGGGAATGGCTGGTGTGCCGCATGCCCCCCTGGCTCGCTCCCAACCTCATCACCGTCGTCGGCCTGGCAACCAACATCTTTACCACGCTGGTGCTGGTTTACTACTGCCCCACTGCCACCGAACAGgCACCGCTGTGGGCGTACCTGATGTGTGCAGTGGGTCTGTTTGTGTATCAGTCTCTGGACGCCATAGACGGGAAGCAGGCGAGGCGCACTAACAGCAGCTCACCACTGGGGGAGCTGTTTGACCACGGCTGTGATTCGCTTTCCACAGTGTTTGTGGTTCTGGGCACCAGTATTGCGGTTCAGTTGGGGACAAATCCAGACTGGATGTTTTTCTGCTGCTTTGCGGGCATGTTTATGTTCTACTGCGCGCACTGGCAGACGTACGTCTCCGGCACTCTGCGCTTCGGCATcaTTGATGTGACTGAAGTGCAGATCTTCATTATTATCATGTATTTGCTGGCTGCTGTGGGCGGATCGGCTTTCTGGCAGGCTCTGATCCCTGTGTTAAACATCCAGATGAAAATAGTTCCAGCTCTCTGCACGTTCGTAGGCGCGGTGGTCTCCTGTACAGGTTACTTCAGAGTCATTTTTACAGGAGGGGTGGGCAAAAATGGATCCACAATAGCGGGAACAAGTGTGTTATCTCCAGTCCTGCACATAGGCTCTGTTATAGTGCTCGCTATGATGATTTATAAGAAATCTGCTATCCAGCTGTTTGAAAAACACCCCTGTCTTTATATTCTGGCGTTTGGCTTCGTTTCTGCAAAAATAACCAACAAATTAGTGGTTGCACACATGACAAAAAGTGAAATGCATCTTCATGACGTGGCGTTTCTGGGCCCCGggcttctgtttctgaatcagtattTCAACAGTTTTATTGACGAGTACGTGGTGCTCTGGATCGCACTGGTGCTGTCGCTGTTTGACCTGGTGCGCTactgcgtgagtgtgtgtaatcagATCGCGTCACACCTTCATATCTTCGTCTTTAAAATCAAACCTCCGACTATGGGAGCAGCTCAGTAACTCCAAGCGACCGCTGCCACTGACTCTCTGCTctgtatagctgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtttatacgtGTGTTTGCCTGCCTGTCCGTGTCTCACACAGTGTCTGAAGGATGAATCTGATGAAATGAATCAGTGATCTATAGAAGGAGGGATTAGGATGAATTGATGCTGGTGTTGCTGGTGGTGTGAGTGCGTCACTGAGAGCTGATGAAGGCGagtgtttgatttatttaaatgattataattaaaaactaaTGCAATCTGTAAGGAAGTTCGGGTGAATGGCGAATTAACAGGTGCTAATACTCTCCCACTTATTTCTGTCTGATCACTCGTTTAGGTTTCATCTTTTAAATAACAGATAAAGATGAAGAATTTGGTGGGAGTGAGTCTGAATATGCTTCAATCGTTCGTTTGTTTATTCCTGTCACGTTCGTTTTCACAGGCGTTCACTTCTCTCGTTCTCAGTATTGCATGCCTTGTCTTTGTTTATAAAATCCTGCTTATCACAAATCtctcatttaatttaaatgtaaaagaagaACATTTAAGTCATTTACGTGAATAGAGACTTTGGCGTTGTCATgaattgctgctgctgctacaaacatattattattgttattattgttgttgttataattataattattattaaagttgTTTAAATCCTTATTTAGACACATTATGACTGTACTGTACTGGTTTGCTTTGTAGAGATTTAAAATATCTCTGATTTCGCTTCATATTTCTTTAAACTCTCATTGTGTTTctaaaaagaacaagaaagcTTTTTAACTGCTAATCTCTCAATATCCCACTAACCCATCACACCTTAATAACGTCTTACAgtcttaaaaaataagtaatagcTCTTTAAACGTTCTTTGCacagacatacagtaccagtttaaattcagtgtttttccattattttaaattttctgcattttagattaataa

Function

symbol description
cept1 Predicted to enable diacylglycerol cholinephosphotransferase activity and ethanolaminephosphotransferase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to act upstream of or within phosphatidylcholine biosynthetic process. Predicted to be located in nuclear membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane.

NR:

description
choline/ethanolaminephosphotransferase 1 isoform X2

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG:

id description
K13644 CEPT1; choline/ethanolamine phosphotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU258364 False 324 lncRNA 0.59 3 17434373 17436915
XM_007256724.3 False 2573 mRNA 0.47 10 17434363 17446741
XM_007256725.3 True 2574 mRNA 0.48 10 17434362 17446741
XM_022682491.1 False 2370 mRNA 0.47 10 17434946 17446741

Neighbor

gene id symbol gene type direction distance location
LOC103036105 cacna1sa,LOC107667627 coding upstream 22291 17369537 ~ 17412071 (+)
LOC103036408 LOC103036408 coding upstream 67633 17362425 ~ 17366729 (+)
lamb3 NA coding upstream 168539 17241432 ~ 17265823 (+)
LOC103038691 NA coding upstream 211084 17216776 ~ 17223278 (+)
LOC103032680 NA coding upstream 327262 17104113 ~ 17107100 (+)
dram2 LOC108413005 coding downstream 11469 17458210 ~ 17465087 (+)
rbbp5 rbbp5,LOC106565113 coding downstream 91232 17537973 ~ 17549957 (+)
LOC103023632 LOC103023632,LOC108415135,LOC107671524,LOC107576648,LOC107698306,LOC107750684,LOC107575492 coding downstream 137411 17584152 ~ 17586613 (+)
LOC103033874 arl8a,LOC107722853,LOC107671521,LOC107569762,LOC107750681 coding downstream 182099 17628840 ~ 17640167 (+)
LOC103033562 LOC108412444 coding downstream 291746 17738487 ~ 17749318 (+)
G190554 NA non-coding upstream 15106 17405044 ~ 17419256 (+)
G190558 NA non-coding upstream 15586 17414275 ~ 17418776 (+)
G190559 NA non-coding upstream 17426 17414782 ~ 17416936 (+)
G190556 NA non-coding upstream 20225 17413136 ~ 17414137 (+)
G190539 NA non-coding upstream 90790 17341090 ~ 17343572 (+)
G190555 NA non-coding downstream 22160 17468901 ~ 17473479 (+)
G190581 NA non-coding downstream 46850 17493591 ~ 17506157 (+)
G190589 NA non-coding downstream 82728 17529469 ~ 17529876 (+)
G190570 NA non-coding downstream 93645 17540386 ~ 17553241 (+)
G190593 NA non-coding downstream 105177 17551918 ~ 17565901 (+)
G190484 irf6,LOC106565674 other upstream 249234 17181122 ~ 17185128 (+)
G190481 strip1,LOC106583081 other upstream 310688 17119945 ~ 17123674 (+)
LOC111195387 cstf1,LOC107555629,LOC107749426,LOC107685639 other upstream 556524 16830909 ~ 16877838 (+)
G190109 acad9,LOC107551129,LOC107749438 other upstream 1654526 15777805 ~ 15779836 (+)
map1lc3a map1lc3a,LOC107551126,LOC107685654 other upstream 1677181 15710930 ~ 15757181 (+)
G190550 NA other downstream 37079 17483820 ~ 17493182 (+)
LOC103024479 LOC108413015 other downstream 61649 17508390 ~ 17513309 (+)
cdkn1a NA other downstream 241776 17688517 ~ 17797302 (+)
G190661 capzb,LOC105897928,LOC106565651,LOC106583096 other downstream 575511 18022252 ~ 18041509 (+)
tmem43 NA other downstream 1023856 18470597 ~ 18482916 (+)

Expression


Co-expression Network