G76480


Basic Information

Item Value
gene id G76480
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 13176185 ~ 13176479 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87260
GTCGGTCATTATTAAAGCAATTAACCCCAAGAAGCCGTGGTTTACAGTGAACTCCGCTCCGCGTCGTGCCTAACATCGCCCCTTAGCTGTTATAAATTCACTGTAAACCACGGCTTCACTGGGCTTATTGCTTTTATAAAACGATTACCACACAATACAAATATCAACGCCAAAAAATATGTATCAATGCAACTTTCATGAAGTAAAATCATTAAAAGGCTTCCTTCCGCTGGAAATAATAGTCCCTGACCGTGAACAGCAACAGAAGTTACGTTATTATGCCATTAGATGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87260 True 295 lncRNA 0.41 1 13176185 13176479

Neighbor

gene id symbol gene type direction distance location
CI01000012_13102619_13168566 PRIM2 coding upstream 7619 13102619 ~ 13168566 (+)
CI01000012_13063943_13081607 NA coding upstream 93618 13062843 ~ 13082567 (+)
CI01000012_13029637_13033226 RGS17 coding upstream 142460 13029435 ~ 13038899 (+)
CI01000012_12930929_12947409 PHACTR2 coding upstream 228776 12930929 ~ 12947409 (+)
CI01000012_12892163_12901139 COG2 coding upstream 274470 12892163 ~ 12901715 (+)
CI01000012_13291350_13311094 NA coding downstream 114871 13291350 ~ 13312156 (+)
CI01000012_13391082_13401374 KIF1BP coding downstream 214603 13391082 ~ 13401692 (+)
CI01000012_13404454_13437477 HKDC1 coding downstream 227975 13404454 ~ 13437722 (+)
CI01000012_13442338_13442897 NA coding downstream 264374 13440853 ~ 13443219 (+)
CI01000012_13445338_13452629 HK2, HKI, HK1, HK1.L coding downstream 268376 13444855 ~ 13452629 (+)
G76475 NA non-coding upstream 113821 13061939 ~ 13062364 (+)
G76468 NA non-coding upstream 115449 13060288 ~ 13060736 (+)
G76466 NA non-coding upstream 118619 13056455 ~ 13057566 (+)
G76470 NA non-coding upstream 120436 13054745 ~ 13055749 (+)
G76473 NA non-coding upstream 121654 13053727 ~ 13054531 (+)
G76506 NA non-coding downstream 18841 13195320 ~ 13195544 (+)
G76511 NA non-coding downstream 27862 13204341 ~ 13204787 (+)
G76513 NA non-coding downstream 29766 13206245 ~ 13208189 (+)
G76514 NA non-coding downstream 31870 13208349 ~ 13208598 (+)
G76516 NA non-coding downstream 32820 13209299 ~ 13209640 (+)
G76374 NA other upstream 427016 12745531 ~ 12749169 (+)
G76385 NA other upstream 500519 12630755 ~ 12675666 (+)
G75533 NA other upstream 2030446 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 2951898 10223697 ~ 10236276 (+)
G76645 NA other downstream 475380 13651859 ~ 13652234 (+)
G76656 NA other downstream 527008 13703487 ~ 13739731 (+)

Expression


Co-expression Network