CI01000013_06761450_06763720


Basic Information

Item Value
gene id CI01000013_06761450_06763720
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6761037 ~ 6764263 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06761450_06763720.mRNA
CTATAAAAGACCCTCAACAAAAGAGGAAAACGACACAAATTCGCTTTCATCTGTGTAACTTACTCTTCATAGCCACAATCATGCGCAGGGGGTATGTTGAACACTTTTTTACGTTTGGCATTTACGCTTGTACGTCTTTAAACATAATTTTAAAAAGCAGAATGTTTTTACAAAAGGTCATTCAGTTTAACGTGGTGATGTTTTTATCTTGTTTTTGGGACCTCTTAAGTTGCATTTGTGTTTGTAAGTTCATGTGTTTAATGTTAATCATTTATTAGAATATCTGCTGGGGCAGGTTAAGTTTTATCAACGTAAATTATATCACTGCATAATTTATGTCAATTTAAGTAGGTAGCTGGCATGAAAAATACTGTACAAACAAACTCAGTACACAATGTTTGTATGTTGCAGGTATGATTGTGGATGGATCCTTGTGCTGTTGGCACTGTTTAATTTCAGTGATGCAGCAAGGTTTCATGAAGCTTTTGGACAACTATGAGAGGTCCACTGGTGTGGCAGAGAGGGTGACCGCTGAGGAGGTGACCGAAAATAACTCCTTTCTGGATGCTATTTTAGATACAGCGGTCATGAAGCGTGCCCACCGGTACCTGATTGGTAAGAGGAAATCACGCTCAGATCTGAGACAGTTTAAGAGTCAGTTGTACTACATGTGGTTCCGTCTTTATCATAGAGACAGAAATGGAGGAGAGGACTCCAGTGGATTTGAGCATGTGTTTGTTGGGGAAACCAAGTTTGGCAGAGAAATCATGGGTCTACACAACTGGGTCCAGTTTTACTTGCAAGAGAAGCAGAATCTTCTTGATTACAAGGGCTACAAAGCCAGGGACAATGATGTGCCTGATGATGATGACCATGTGTTGAACGTGCAGTTCAGCTGGCATGGTTTGGTCAAGCCAGTGGCCAGCGCCTTTGTTGGTGTGAGTCCTGAGTTTGAGATGGCCATCTTTACCATCCTGTTCCTCACGTCCACTGAGAAGACCACCACAGCCGTGGTCAATATGGATGAGTACCAGCTGGAGATGGTGGTGCACAGACATGGTCGCTCTATCGGGACCGCTTATCCCAAACTGCTGAGCAGCAACAACAGACATGTATAAATCCCACACTAACCTGAAAGTAGCTTTTGAGCTTTTTTACATTTAAAAAAAGAAAAAAAGAAAAAAGGCATATTGTAATTTTAAATGCGTAGATATTTGTTGTGTATTGGAGAAGTCTTCATTTTAGATGCTTGTGTTTACTAATATGTTAAACTACACTACGCTCAATTTATTTTAAAATACGAGCAAATATTAAATTTTCTCATATAATGGTCATCTTTTATATCTGTTTGCCTATTTTGACCACGACTGCTGTTATATACATTGTTGGTTATGGAAAATAGAGCATTAAAAAGAATTTCTTGATCCACTTGTGATTGTTTATTTGCAGAATTCGTTACATGTATCTCTCTACTATATACGTCACAATGGTGAATTAAAGATGCTCGCAACTTATGTATCATGCCGACTTATAAAGTTGCTATAAACAATTGTTACACATACAGATTCATGGCCTCATATTAGTGAGAGACAATGTGGAATATTTAGGATTTTAAAAATTAATTTGTCACACCACAGCATGATTTAAGTTAACTGCAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06761450_06763720.mRNA True 1661 mRNA 0.38 5 6761037 6764263

Neighbor

gene id symbol gene type direction distance location
CI01000013_06737670_06759152 PPFIBP1B, PPFIBP1 coding upstream 1777 6737670 ~ 6759260 (+)
CI01000013_06727503_06728691 NA coding upstream 32024 6727503 ~ 6729013 (+)
CI01000013_06705612_06716925 ARNTL2 coding upstream 43931 6705612 ~ 6717106 (+)
CI01000013_06635640_06638681 NA coding upstream 122037 6635350 ~ 6639000 (+)
CI01000013_06548714_06565582 PLEKHG7 coding upstream 194914 6547969 ~ 6566123 (+)
CI01000013_06765502_06790599 POLR3B coding downstream 1239 6765502 ~ 6790923 (+)
CI01000013_06795895_06815354 RFX4 coding downstream 31632 6795895 ~ 6816197 (+)
CI01000013_06817434_06826090 RIC8B coding downstream 53171 6817434 ~ 6826090 (+)
CI01000013_06850663_06853811 TMEM263 coding downstream 86400 6850663 ~ 6855001 (+)
CI01000013_06915872_06917002 MTERF2 coding downstream 151250 6915513 ~ 6918255 (+)
G81870 NA non-coding upstream 73908 6683582 ~ 6687129 (+)
G81862 NA non-coding upstream 90407 6666733 ~ 6670630 (+)
G81864 NA non-coding upstream 106767 6653940 ~ 6654270 (+)
G81843 NA non-coding upstream 116119 6615518 ~ 6644918 (+)
G81790 NA non-coding upstream 309105 6451725 ~ 6451932 (+)
G81904 NA non-coding downstream 98939 6863202 ~ 6863421 (+)
G81918 NA non-coding downstream 117693 6881956 ~ 6882224 (+)
G81920 NA non-coding downstream 123230 6887493 ~ 6887821 (+)
G81883 NA non-coding downstream 140793 6905056 ~ 6905344 (+)
G81939 NA non-coding downstream 223630 6987893 ~ 7085501 (+)
CI01000013_06076169_06080164 NA other upstream 678670 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 701541 6049864 ~ 6060269 (+)
G80845 NA other upstream 1924805 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2695208 4050837 ~ 4065829 (+)
G80062 NA other upstream 3176253 3584008 ~ 3584784 (+)
G81994 NA other downstream 571682 7335945 ~ 7338239 (+)
G82168 NA other downstream 1264075 8028338 ~ 8041343 (+)
G82581 NA other downstream 2565066 9329329 ~ 9334948 (+)
G84005 NA other downstream 2837348 9601611 ~ 9602235 (+)
G84194 NA other downstream 3266345 10030608 ~ 10036953 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013315 endouc coding NC_007129.7 CM002902.2 15459318 ~ 15467446 (-)