CI01000013_06635640_06638681


Basic Information

Item Value
gene id CI01000013_06635640_06638681
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6635350 ~ 6639000 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06635640_06638681.mRNA
TTATAAATGAAGCCTAATTAACCCTACATTTCCATATTTTCAGTCTTTAAATAATAAAACTTGATGACATTAAACTTAATAAAAATATATTGAAAAGTGTATTCATGAAGCACCTCCTCTTTCTCTCTGTCTCTCTCTCACTCTCTTTCCCCTAATACCTCTTTTATTTGAATGGGAGGGTCTTTAGTTTTCGGTGAGAATAGATGCCAGACAGAATTAACTTTTGGACCTCTTCACAGCGGTGTACAAACTGAGGCTTACAGGAGACAAAGGAGCAGGTCATCACAGATATGAAGTTTCTGCAGATACTTAGACCAGCTGGCGTGACATTATGGAGACCAAGCAGTGGTGTTTCCTGTTTACTTGGGCTGGTCACATGTCTGGGCTGTGTAGCATCCTTCAACATCACCCCAGTGACTTCAGGCCTGCGCTCTGCCTTTTCTGCCACACGTAGCAGCAGCGTGTTGGGTGGCACTCAGCGAGCTGTGACCTTTGACCGCCTTCTAGTCAACATCGGTAATGACTTCAACCCAGATACAGGCAGTTTTCGATGTCGCCTGCCTGGTGCGTACTACTTCTCGTTCACTGTGGGAAAGTTCCCGAAGAAGATGCTGTCTGTCATGCTGGTGAAGAACAGGATGGAGGTGCAGGCCATGGCGTACGACGGATACCAGAAACAGGGTCGCAAGGTGCAGAGCCAGAGTGTGATGGTCAGTCTGAAGCCCATGGATACGGTCTACCTGCTGCTTCACGAGAATCCTGACTACGCCATCTACAGCAACGTTGGACCATACATCACATTTAGCGGTTATCTAGTCTACCCAGACTCCACATCGCCTGTTGGATATCTCAATAACCACCTATCTCCTCCAGGCCTCCATCTTCCAGGTTGTCCTCCCTCTATAGATCCCTATTATGATTGGAGAAGAACAACACCCGGTGAGGAACCACGTTCTGCGTTTTCAGTGGCAAGAACATTATCAGCGTTGGGAGAAAGCAGAGGGCGTCGTGAAAGAGAAGCTCTCACGTTTGACGTCGAATACGTTAACATAGGCGGCCATTTTAACAAAACATCCGGACGTTTCACCTGCCACTTCCCCGGCGCGTACTACTTTGCATTTACTGTGGGGAAACACCCTCGTCGGGCGGTGTCGGTGAAGCTGATGACGGGCAGAGGGGAGGTGCGGGCCATGGTTTTTAATGAGGACATGTCGCGACGGAGAGAGATGCAGAGTCAGAGTCTGCTGTTGTCACTGAAAAAAGGAGACAGCGTCTGGCTGTACAGTCAGCAGGAAGGCGGATACGCCGTTTACAGCAACCAGGGACGTTTCACGACCTTCTCTGGATTCCTGGTCTATCCTGATGTCGAATCCATGTACAGAGACACAACTTTCCCCTGAGAACCAATACTGAATAATTCATAGCTCCGCCTTTAACTTTTTGTTTTTGTACTAAATCTGTCAATAGTTGTGGTCCTTAACACAGTGTTATTGTTATGTGCTTTTACACATCACAAATTATAATGTAAATATTGTAAATTTTTTTGGGGTAAAACTTAAAAGAAACAGTAACAGCTTTTATTAATGACATTAACAAACATTACATTAGCAGATCATTAGTGAATGTAGATTAAAATGGAATTCATATATATTCATATTTAAATGTAAATGAACTACTGATCTAAGCTTATAATTTGTATTACTTACAAATATTAGTTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06635640_06638681.mRNA True 1719 mRNA 0.44 2 6635350 6639000

Neighbor

gene id symbol gene type direction distance location
CI01000013_06548714_06565582 PLEKHG7 coding upstream 69227 6547969 ~ 6566123 (+)
CI01000013_06440333_06446814 SSPN coding upstream 188155 6439626 ~ 6447195 (+)
CI01000013_06405275_06423872 SLC6A15 coding upstream 210829 6404196 ~ 6424521 (+)
CI01000013_06311729_06313001 RASSF9 coding upstream 321226 6311729 ~ 6314124 (+)
CI01000013_06278898_06283356 MGAT4C coding upstream 350196 6278898 ~ 6285154 (+)
CI01000013_06705612_06716925 ARNTL2 coding downstream 66612 6705612 ~ 6717106 (+)
CI01000013_06727503_06728691 NA coding downstream 88503 6727503 ~ 6729013 (+)
CI01000013_06737670_06759152 PPFIBP1B, PPFIBP1 coding downstream 98670 6737670 ~ 6759260 (+)
CI01000013_06761450_06763720 NA coding downstream 122037 6761037 ~ 6764263 (+)
CI01000013_06765502_06790599 POLR3B coding downstream 126502 6765502 ~ 6790923 (+)
G81790 NA non-coding upstream 183418 6451725 ~ 6451932 (+)
G81789 NA non-coding upstream 183681 6451459 ~ 6451669 (+)
G81765 NA non-coding upstream 186172 6448563 ~ 6449178 (+)
G81762 NA non-coding upstream 209308 6381822 ~ 6426042 (+)
G81864 NA non-coding downstream 14940 6653940 ~ 6654270 (+)
G81862 NA non-coding downstream 27733 6666733 ~ 6670630 (+)
G81870 NA non-coding downstream 44582 6683582 ~ 6687129 (+)
G81904 NA non-coding downstream 224202 6863202 ~ 6863421 (+)
G81918 NA non-coding downstream 242956 6881956 ~ 6882224 (+)
CI01000013_06076169_06080164 NA other upstream 552983 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 575854 6049864 ~ 6060269 (+)
G80845 NA other upstream 1799118 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2569521 4050837 ~ 4065829 (+)
G80062 NA other upstream 3050566 3584008 ~ 3584784 (+)
G81994 NA other downstream 696945 7335945 ~ 7338239 (+)
G82168 NA other downstream 1389338 8028338 ~ 8041343 (+)
G82581 NA other downstream 2690329 9329329 ~ 9334948 (+)
G84005 NA other downstream 2962611 9601611 ~ 9602235 (+)
G84194 NA other downstream 3391608 10030608 ~ 10036953 (+)

Expression


Co-expression Network