Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000013_06737670_06759152 |
| gene name | PPFIBP1B, PPFIBP1 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 6737670 ~ 6759260 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| ppfibp1b | Predicted to be involved in neuromuscular junction development. Predicted to be active in presynaptic active zone. Orthologous to human PPFIBP1 (PPFIA binding protein 1). |
| ppfibp1 | Enables cadherin binding activity. Predicted to be involved in neuromuscular junction development. Located in focal adhesion. |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000013_06737670_06759152.mRNA | True | 3131 | mRNA | 0.50 | 26 | 6737670 | 6759260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_06727503_06728691 | NA | coding | upstream | 8657 | 6727503 ~ 6729013 (+) |
| CI01000013_06705612_06716925 | ARNTL2 | coding | upstream | 20564 | 6705612 ~ 6717106 (+) |
| CI01000013_06635640_06638681 | NA | coding | upstream | 98670 | 6635350 ~ 6639000 (+) |
| CI01000013_06548714_06565582 | PLEKHG7 | coding | upstream | 171547 | 6547969 ~ 6566123 (+) |
| CI01000013_06440333_06446814 | SSPN | coding | upstream | 290475 | 6439626 ~ 6447195 (+) |
| CI01000013_06761450_06763720 | NA | coding | downstream | 1777 | 6761037 ~ 6764263 (+) |
| CI01000013_06765502_06790599 | POLR3B | coding | downstream | 6242 | 6765502 ~ 6790923 (+) |
| CI01000013_06795895_06815354 | RFX4 | coding | downstream | 36635 | 6795895 ~ 6816197 (+) |
| CI01000013_06817434_06826090 | RIC8B | coding | downstream | 58174 | 6817434 ~ 6826090 (+) |
| CI01000013_06850663_06853811 | TMEM263 | coding | downstream | 91403 | 6850663 ~ 6855001 (+) |
| G81870 | NA | non-coding | upstream | 50541 | 6683582 ~ 6687129 (+) |
| G81862 | NA | non-coding | upstream | 67040 | 6666733 ~ 6670630 (+) |
| G81864 | NA | non-coding | upstream | 83400 | 6653940 ~ 6654270 (+) |
| G81843 | NA | non-coding | upstream | 92752 | 6615518 ~ 6644918 (+) |
| G81790 | NA | non-coding | upstream | 285738 | 6451725 ~ 6451932 (+) |
| G81904 | NA | non-coding | downstream | 103942 | 6863202 ~ 6863421 (+) |
| G81918 | NA | non-coding | downstream | 122696 | 6881956 ~ 6882224 (+) |
| G81920 | NA | non-coding | downstream | 128233 | 6887493 ~ 6887821 (+) |
| G81883 | NA | non-coding | downstream | 145796 | 6905056 ~ 6905344 (+) |
| G81939 | NA | non-coding | downstream | 228633 | 6987893 ~ 7085501 (+) |
| CI01000013_06076169_06080164 | NA | other | upstream | 655303 | 6075400 ~ 6081684 (+) |
| CI01000013_06050285_06059640 | NA | other | upstream | 678174 | 6049864 ~ 6060269 (+) |
| G80845 | NA | other | upstream | 1901438 | 4835078 ~ 4836232 (+) |
| CI01000013_04051081_04064651 | NA | other | upstream | 2671841 | 4050837 ~ 4065829 (+) |
| G80062 | NA | other | upstream | 3152886 | 3584008 ~ 3584784 (+) |
| G81994 | NA | other | downstream | 576685 | 7335945 ~ 7338239 (+) |
| G82168 | NA | other | downstream | 1269078 | 8028338 ~ 8041343 (+) |
| G82581 | NA | other | downstream | 2570069 | 9329329 ~ 9334948 (+) |
| G84005 | NA | other | downstream | 2842351 | 9601611 ~ 9602235 (+) |
| G84194 | NA | other | downstream | 3271348 | 10030608 ~ 10036953 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
