G80197


Basic Information

Item Value
gene id G80197
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3463466 ~ 3465034 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91316
TTTACATCAAAATGTATTTTTATTTTCTTTCTTTCATGTATTGTTATATTTGAGTCAAAATAAAGTTAATAGTAAAATAAATTACAATCCTAGACAATTAAAAATGTAAAGTATCTCTAATCTTTATAAAGCGTTTTTTCAACATATTATTTTATCTGTGAATTTCTTTGGAAACATCTAGACAAGTTAATAAAAACTAAAACGATAAAACATTTGCTTATGCATATATTAATTGATAACTTAGTAACTGATTGTACTGTAACTGCTCTTCTCATTTAGTCCAAATTCCCTTTAATACAGTTGAGGAGGAATACATCACTGTATTAGAGTGCAAGTCTGTTTGTCCCTTTGAATGTATGTTTGTTCTTCAACTCTTTTTATCAAGACATAGTGACAGGAATACTGATGGTTATGTAACGTTGCTAATTTTAGTTGTTCTTAAAGGGATAGTTCAGGAAGGATGTGAATGCATCATACAGAGTATACGTGTCATATTAATATCTAGTCTCACAGTCATATATTTGTACCACAGTTTTTACTGCGGTGTGGACAATATCAAAAGTAAACTAAATGAACCTAGCCTAAATTTTGACTCAGCGAGTCTTGAGGCACTGCAAAGTCCATAAAGTTACTTGAACCCTGAATAAGATACATGAGAAGCATTAAGGAGTAGTCCTACACTGTATGCCATTCTACATTGTTAAGCTGTCTGGGTGGAAGTGCAAATCTGTGCGGAAGTATTTCAAGAGCAGCTAAATGTGGTAAGTGGTTACGCTACATGTTTGTCACTAAATTGCTGACTATCTTTTGCAGGTCTTCGGTTCGCATACGGGTGGTTTCCAGGACCTCTTCATGATTAGCCCTTTCCTTGCTGTTGTAGTCAGTCACGACCTTGTTGGTAATAAGGGAGAGTCCAAACACACGCATCCCACAGTGCCGAGCGACCACCACCTCTGGAACGGTACTCATACCTAATTACAGAGAAACACAACGCTCACCAAGGCTGCATTTATTTAATGAAAAATACAGCAAAAATAGTAGAAATATTACTACAATTCAAAATAATTCTTTTCTATTTTAGTTTATTTTAATTTAATTTATTCCTGTGGATTTTCCACAGACATTACTCAAGTCTTCAATGTTGCATGATGCTTCAGAAATCATTCTAACCTGCTCAAGCAACATTTCTTATTATTATCTATGTTGAAAACAGTTGTGCTGCTTAATATTTTTGTGGAAACTGTTATACATATTTGGA

Function

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91316 True 1258 lncRNA 0.34 2 3463466 3465034

Neighbor

gene id symbol gene type direction distance location
CI01000013_03387692_03454629 HYDIN coding downstream 8837 3387692 ~ 3454629 (-)
CI01000013_03375650_03387110 HYDIN coding downstream 76303 3375408 ~ 3387163 (-)
CI01000013_03275705_03371030 NECAB2 coding downstream 92436 3275705 ~ 3371030 (-)
CI01000013_03102811_03111426 DNAH6 coding downstream 352040 3102609 ~ 3111426 (-)
CI01000013_03051289_03084843 RANBP10 coding downstream 378208 3050467 ~ 3085258 (-)
CI01000013_03538324_03552770 CHKA coding upstream 73290 3538324 ~ 3552770 (-)
CI01000013_03555460_03561041 KMT5B, SUV420H1 coding upstream 90345 3555379 ~ 3561593 (-)
CI01000013_03585420_03587386 ARPIN coding upstream 120218 3585252 ~ 3587386 (-)
CI01000013_03588879_03592043 NA coding upstream 123733 3588767 ~ 3592043 (-)
CI01000013_03710900_03714487 NA coding upstream 245725 3708952 ~ 3714487 (-)
G79929 NA non-coding downstream 220068 3242903 ~ 3243398 (-)
G79856 NA non-coding downstream 262756 3200487 ~ 3200710 (-)
G79852 NA non-coding downstream 268482 3192245 ~ 3194984 (-)
G79842 NA non-coding downstream 299090 3162610 ~ 3164376 (-)
G79779 NA non-coding downstream 578502 2884672 ~ 2884964 (-)
G80243 NA non-coding upstream 10546 3475580 ~ 3475820 (-)
G80191 NA non-coding upstream 12031 3477065 ~ 3489355 (-)
G80210 NA non-coding upstream 37475 3502509 ~ 3502984 (-)
G80212 NA non-coding upstream 38820 3503854 ~ 3504284 (-)
G80201 NA non-coding upstream 41585 3506619 ~ 3508512 (-)
G79690 NA other downstream 648074 2813247 ~ 2815392 (-)
G78296 NA other downstream 3436569 26528 ~ 26897 (-)
G80262 NA other upstream 100137 3565171 ~ 3567537 (-)
G80271 NA other upstream 254399 3719433 ~ 3723607 (-)
G80399 NA other upstream 439033 3904067 ~ 3906240 (-)
G80443 NA other upstream 599908 4064942 ~ 4066017 (-)
CI01000013_04561253_04567647 MAP2K1 other upstream 1091834 4560340 ~ 4567647 (-)

Expression


Co-expression Network