CI01000015_02475219_02478793 (B3GNT7)


Basic Information

Item Value
gene id CI01000015_02475219_02478793
gene name B3GNT7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 2474987 ~ 2478856 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_02475219_02478793.mRNA
CTATAAAAGCACACTTTATGGAAAATGTTTTTTTTTCTTTTTCAAACTATATGATGATCAAAAAATATGTATTTTATTTTATTAAATATTTATATAGTTATATATTTATAGATTAAAAAAAATAATATTTTGTAAAAATAAATACACTTTTTATTTTATCAGATTTGGCATTTGATGAACACATAAATCTTGTTTTATTTTGCTTTATTACTATATAGAGGGAAAATGTAAAATGGCAAAGTTACTCCAATGTGCCTCAAAAAATGACGCAAGTTTTTGCATCAGATCTTTATTGAAACTATGCACCGGATTGTCTAAAGAGACTATTTCATCTGAAGAGCAGAAGACCTATTTCACATATCTTATACAAAATAAAATACAGACAAGACAAACTCTCAAAATGATGACCACAAGAGAACGATGGAGAGTTTACAAGCGCATTAGCCTGATGTTCTTCCTGGCTATAGTCACACTTACTGTGGTTCACAGAGGAAACATCACCTCATTACAAGACTTCCAGACAGACAGGATCGAGAGGCAAACACGGATGGAGCTCATGGCGGAAGGCGAGCTGCAGAAAAAGGGCTTGGTTACTATAAACTTCTGGAAGAGTAGTTTAGTAAGATTGGAGTCCAACACAGAAGGTCCAAGAACAACCCAAAGGCAAAGGCCTACAACCTGGGACGTCACCGCCTCCAACTGCAGCATCAACCTCAACTTCTCTTCATCAGACTGGTTCACGGGTCTTGAAGCCAACTTCAAGCAGTTCCTGGTTTACAGGCACTGCCGATACTTTCCCATCCTCATGAATCATCCAGAGAAGTGCGCTGGAGACGTAGACTTGCTGATGGTCATCAAGTCAGTAATAACACAGTATGATCGGAGGGAGGTCATAAGGCAAACTTGGGGCAAAGAACAAGTGATCAACGGAAAAAGAATCAAAACTCTTTTCCTTCTCGGAACGTCGTCCAACGAAGAAGAACGAGTGAACCATCAGAAGCTTCTGGAATATGAGGATTACATTTACGGAGATATCCTGCAATGGGACTTCATGGATAGCTTTTTCAATCTTACCCTCAAGGAGATCCACTTCCTAAAATGGTTCTCCATCTACTGCGGAAGCACCCGTTACATCTTCAAAGGCGACGATGACGTGTTTGTCAGCGTTCCCAACATCTTGGAGTATCTGGAAGTCAGCAAAGACTTGAAGGACCTCTTTGTTGGCGACGTTCTCTTCAAAGCCAAGCCCATTCGCAAAAAGCAGAACAAGTATTACATCCCACAAGCCTTGTATAATAAGACGCTCTACCCACCGTATGCCGGTGGAGGTGGTTTCCTGATGGATGGCCCTTTGGCACGGAAACTCTACGAAGCTTGCGAAACTCTGGAACTTTATCCTATTGATGATGTGTTTCTTGGAATGTGTTTGGAGGTGCTTCAAGTAACTCCAATAAAACACGAAGCTTTCAAAACGTTTGGGCTCGTGAAGAACAAAACCAGTCGACTGAACAGGGAGCCGTGTTTCTTTAAGAGCATGATAGTGGTTCATAAATTGCTTCCGCCGGATCTAAAAAACATGTGGAAACTGGTCAACAGTGACTTGATCTGTTCGCAGAAAATGGAATTCTTATAGTCTAAGACGTTGCTGCTGTTTCTAAATCTGAAAGATCTCAGAATTTATTCATAATTGAAGGAA

Function

symbol description
b3gnt7 Predicted to enable UDP-glycosyltransferase activity. Predicted to be involved in poly-N-acetyllactosamine biosynthetic process. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane. Is expressed in several structures, including Kupffer's vesicle; axis; hypochord; optic primordium; and optic vesicle. Orthologous to human B3GNT7 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7).

GO:

id name namespace
GO:0008921 lipopolysaccharide-1,6-galactosyltransferase activity molecular_function

KEGG:

id description
K09664 B3GNT7; beta-1,3-N-acetylglucosaminyltransferase 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_02475219_02478793.mRNA True 1696 mRNA 0.40 3 2474987 2478856

Neighbor

gene id symbol gene type direction distance location
CI01000015_02452032_02454972 NA coding upstream 19894 2451584 ~ 2455093 (+)
CI01000015_02428969_02441818 NA coding upstream 32564 2428969 ~ 2442423 (+)
CI01000015_02419171_02421041 NA coding upstream 53193 2418984 ~ 2421794 (+)
CI01000015_02366085_02370003 NA coding upstream 104512 2365714 ~ 2370475 (+)
CI01000015_02268895_02277023 NA coding upstream 197904 2268615 ~ 2277083 (+)
CI01000015_02512276_02523824 NA coding downstream 32690 2511546 ~ 2524572 (+)
CI01000015_02761141_02775710 NA coding downstream 282195 2761051 ~ 2775827 (+)
CI01000015_02776634_02783843 NA coding downstream 297034 2775890 ~ 2783979 (+)
CI01000015_02800104_02818680 NA coding downstream 321248 2800104 ~ 2819375 (+)
CI01000015_02826599_02827203 NA coding downstream 347047 2825903 ~ 2827255 (+)
G88289 NA non-coding upstream 105935 2368833 ~ 2369052 (+)
G88258 NA non-coding upstream 110839 2327393 ~ 2364148 (+)
G88255 NA non-coding upstream 118835 2353508 ~ 2356152 (+)
G88252 NA non-coding upstream 150409 2324356 ~ 2324578 (+)
G88246 NA non-coding upstream 161831 2312877 ~ 2313156 (+)
G88343 NA non-coding downstream 86402 2565258 ~ 2565458 (+)
G88345 NA non-coding downstream 89159 2568015 ~ 2568349 (+)
G88576 NA non-coding downstream 103845 2582701 ~ 2582902 (+)
G88577 NA non-coding downstream 104592 2583448 ~ 2583650 (+)
G88671 NA non-coding downstream 411212 2890068 ~ 2899011 (+)
G87972 NA other upstream 598393 1876004 ~ 1876594 (+)
G87432 NA other upstream 863600 1611083 ~ 1611387 (+)
CI01000015_03011472_03026518 NA other downstream 544140 3011472 ~ 3026636 (+)
G89822 NA other downstream 1812990 4291846 ~ 4314351 (+)
G90622 NA other downstream 2735440 5203697 ~ 5400121 (+)
CI01000015_05409997_05413784 NA other downstream 2929510 5409997 ~ 5413845 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020596 b3gnt7 coding NC_007133.7 CM002906.2 36656680 ~ 36661461 (+)