G88255


Basic Information

Item Value
gene id G88255
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 2353508 ~ 2356152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU100471
AGTCAAAGTCTCTCGTCTGTGGAGTCCAAATGAGCCTGTTGTTTTTGGGCTTGGGATATTTTTTATATTGAATATATTACATATTAAAATCGGACTTCTTGTCAGGTGTGTTAAAGACTAGTGAGAGTTGCATGACCCCAACCTTCCATTCCGATTACAGAGAGCCAGGAAGTCTCCATGTGCCAGCCACACTTCACACAAGGTGGAATTAATCCAGATGTCCACATATTTCCTCCAATAAAAACAACACAATCCGCTTTAAGACATGGTGTACCATTACAGGCTGGTGTGAGAACGCACTTTTAGAACAGTCCCAAGTAACCCTGCAGCATTTCTGTTGGCACGCCAAGCTAGATACAAAACTCACTGAAGGCATTAAAACCAAAGTGATGTACTAAATGAAAAATGTCATTAGGCTTTTAAAACTATTTTTTCCTTTTTGGGGGGAGTGGCATTCAAGGAATATAATGTAGGCCATTCTATGCTATTTGTTTTAGGTTTCGTTTGAGGCAACAATGGACTCAAAAGCTCATTAGCATAATGTGATGTGAAAAACAAGTTATTTCTGGAAAAAAAATCCTCTTTTTTGTTTTGTTTATTTTTAAGTGAAAGTCAGTAGGGTCAGATGTTTTTCATTGTTGAAAAATATCTCTGTTTTGTTTTGTCTGTACAATGAAAGTCCAATGAGGGCCAATGTTTTGTTGTTTTGGACTAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100471 True 717 lncRNA 0.38 2 2353508 2356152

Neighbor

gene id symbol gene type direction distance location
CI01000015_02268895_02277023 NA coding upstream 76425 2268615 ~ 2277083 (+)
CI01000015_02012379_02029276 EPHB3 coding upstream 323807 2012379 ~ 2029701 (+)
CI01000015_01688642_01691631 NA coding upstream 661567 1688642 ~ 1691941 (+)
CI01000015_01638133_01646368 HYKK.2, HYKK coding upstream 707099 1635426 ~ 1646409 (+)
CI01000015_01580548_01582805 TCTEX1D2 coding upstream 770430 1580548 ~ 1583078 (+)
CI01000015_02366085_02370003 NA coding downstream 9562 2365714 ~ 2370475 (+)
CI01000015_02419171_02421041 NA coding downstream 62832 2418984 ~ 2421794 (+)
CI01000015_02428969_02441818 NA coding downstream 72817 2428969 ~ 2442423 (+)
CI01000015_02452032_02454972 NA coding downstream 95432 2451584 ~ 2455093 (+)
CI01000015_02475219_02478793 B3GNT7 coding downstream 118835 2474987 ~ 2478856 (+)
G88252 NA non-coding upstream 28930 2324356 ~ 2324578 (+)
G88246 NA non-coding upstream 40352 2312877 ~ 2313156 (+)
G88245 NA non-coding upstream 41042 2312244 ~ 2312466 (+)
G88242 NA non-coding upstream 45647 2307541 ~ 2307861 (+)
G88241 NA non-coding upstream 46307 2306838 ~ 2307201 (+)
G88289 NA non-coding downstream 12681 2368833 ~ 2369052 (+)
G88172 NA non-coding downstream 36069 2384016 ~ 2526510 (+)
G88343 NA non-coding downstream 209106 2565258 ~ 2565458 (+)
G88345 NA non-coding downstream 211863 2568015 ~ 2568349 (+)
G88576 NA non-coding downstream 226549 2582701 ~ 2582902 (+)
G87972 NA other upstream 476914 1876004 ~ 1876594 (+)
G87432 NA other upstream 742121 1611083 ~ 1611387 (+)
CI01000015_02512276_02523824 NA other downstream 155946 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 666844 3011472 ~ 3026636 (+)
G89822 NA other downstream 1935694 4291846 ~ 4314351 (+)
G90622 NA other downstream 2858144 5203697 ~ 5400121 (+)

Expression


Co-expression Network