G88576


Basic Information

Item Value
gene id G88576
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 2582701 ~ 2582902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU100855
CTGACTGCTATTATGATTAAAATCAATAAAAGATTTAAAGAAGTGACTAAAACAGCAGAATGACCTGGTATTGGGAATAATCAATAGCACTAGTGATTAACCATTAGATTAGCTTTGGAAATCACTATATAGTTGGTCACAGGTGCAGCGTTTTCAGGACCACACCATGTGTGTGTCCCTCCATGAAGTTTAGTCAACATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100855 True 202 lncRNA 0.37 1 2582701 2582902

Neighbor

gene id symbol gene type direction distance location
CI01000015_02512276_02523824 NA coding upstream 58129 2511546 ~ 2524572 (+)
CI01000015_02475219_02478793 B3GNT7 coding upstream 103845 2474987 ~ 2478856 (+)
CI01000015_02452032_02454972 NA coding upstream 127608 2451584 ~ 2455093 (+)
CI01000015_02428969_02441818 NA coding upstream 140278 2428969 ~ 2442423 (+)
CI01000015_02419171_02421041 NA coding upstream 160907 2418984 ~ 2421794 (+)
CI01000015_02761141_02775710 NA coding downstream 178149 2761051 ~ 2775827 (+)
CI01000015_02776634_02783843 NA coding downstream 192988 2775890 ~ 2783979 (+)
CI01000015_02800104_02818680 NA coding downstream 217202 2800104 ~ 2819375 (+)
CI01000015_02826599_02827203 NA coding downstream 243001 2825903 ~ 2827255 (+)
CI01000015_02846943_02876819 ACAP2 coding downstream 264041 2846943 ~ 2876819 (+)
G88345 NA non-coding upstream 14352 2568015 ~ 2568349 (+)
G88343 NA non-coding upstream 17243 2565258 ~ 2565458 (+)
G88172 NA non-coding upstream 56191 2384016 ~ 2526510 (+)
G88289 NA non-coding upstream 213649 2368833 ~ 2369052 (+)
G88258 NA non-coding upstream 218553 2327393 ~ 2364148 (+)
G88577 NA non-coding downstream 546 2583448 ~ 2583650 (+)
G88671 NA non-coding downstream 307166 2890068 ~ 2899011 (+)
G88693 NA non-coding downstream 324876 2907778 ~ 2909634 (+)
G88712 NA non-coding downstream 464538 3047440 ~ 3172378 (+)
G88745 NA non-coding downstream 602935 3185837 ~ 3186144 (+)
G87972 NA other upstream 706107 1876004 ~ 1876594 (+)
G87432 NA other upstream 971314 1611083 ~ 1611387 (+)
CI01000015_03011472_03026518 NA other downstream 440094 3011472 ~ 3026636 (+)
G89822 NA other downstream 1708944 4291846 ~ 4314351 (+)
G90622 NA other downstream 2631394 5203697 ~ 5400121 (+)
CI01000015_05409997_05413784 NA other downstream 2825464 5409997 ~ 5413845 (+)
G90777 NA other downstream 3321192 5744146 ~ 5907461 (+)

Expression


Co-expression Network