CI01000015_02776634_02783843


Basic Information

Item Value
gene id CI01000015_02776634_02783843
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 2775890 ~ 2783979 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_02776634_02783843.mRNA
GTATATATTGCACAATGGAAAACTCTTTTGCACTGTGATTATAAATTTCAAACATGAGACACCAATAAACTTTGTAAAAGAAAACAGTCATATTGTCTGTATTATCAATTAAATAGCAGTTTAATAATTGCTGTCGGATATTGAAAGTGAATATATATATACATGACCGTGATGCCAGTTCACTCTTTGTTTTTTCTCGAACTACTTTTAGTAGGTACTAACCACTGCATAACGTAAACACCCCACAAGAAGACCAGCGTTATGGAGATGCTCTGACCCAGTCATCTAGCCATCGCTGTTTGACCTTTGTCAGAGCTACTCACCATTTTTCATGTTTTCAACAAATGAAATTTAAGAACTGACTGTTCGCTTGCTGCCTAATACTGTATATCCCACCCCTTGACAGGTGCCACTGTATTGACAAAGTCAATGTTATTTACTTCACCTATCAGTGGTTTTAATGTTGTGGCTGATCAGTATATAGTTCATTTCACTAAGTTCAGTAAAGATCTGGATATCACAGTAAAGAACAGCATAGTACAGAGCAGTTAACAGCAGCGCAATTCACTAAAGAACAGTACAATTCAAAACAATTCTCTAAAGAACAGTACAGTTCAGAACCAAAAAAATCCCTGAACAGTTCAGACCAGTGCAGTTTTTAGATCAGTATTCATATCATCATATTCAAATAACTTCATGCATGATTAACAGTTCACGTTGCAAAACAGTGACTGGGAACTGCAAATGAACTTTGGTCTGAGAGAAGACTATAAACAGAAGAGCATCAAGAAGATTGACAGAGCTGTCAGTGCTGCTGCAGTCACTCAAACCATGGCCACGGCACAGACCCTTCTGATTATTGGAATATTTGTTTTAGTAGGCTTTGATGGATGTTTCTCCGCTAGTCCTGAGGAGGAGCAGAACCCAAACTTTTGGTATGTTAAGGGTAAAGAGGCTCTTCGTGCATCCCTCTCCATGACGTTCAACATGCATCGTGCTAAAAATCTTATCCTCTTCCTTGGAGATGGCATGGGAATCAGCACTGTAACCGCAGCAAGAATCCTGAAGGGACAGATGGAAGGGAAGACAGGAGAGGAGAGTGCCCTGGCCATGGACTCATTCCCTCATCTGGCTCTCTCCAAGACCTACAATGTTGATCAGCAGATGCCTGACAGTGCAGCAACAGCCACTGCATATCTCTGTGGTGTGAAGGCAAACTATGGCACTCTGGGCCTAAGTGCAGCCGCACGCCGCTATAACTGCAGCACCGCTAAAGGCAACGAGGTCAAATCAATTCTTCATAAGGCAAAGATGGCAGGGAAGTCTGTTGGCATAGTAAGCACGACACGTGTCCAGCATGCATCACCCGCCGCCAGTTACTCCCACACTCCTGAAAGAGGCTGGTACAGCGATAAAGAGCTGACCTCTGAAGCTATCGCAGGGGGATGCAAGGATATTGCATACCAACTCGTCCATAATACTGATATAAACGTTATTTTAGGTGGTGGAAGACAGTACATGTTTCCCAAGGAAACTGTTGATCCTGAATACCCCACAGTTACAGGGAGCCGAGAAGACAAAACAGATCTCGTTCAAGAGTGGTTAAAAAACAGAGAAGTTATTCTCAATGTTTTGATTTTCAGTGATTCTCATTGTGATTTAATGCTGTTGTTTTCATTGTTGTGCTTAGGGCTTTTTGAGCCATCGGACACCAGTGGGAGAATAGATCATGGCCATCATGCAGGCAAGGCCAAGTATGCTTTGACTGAGGCTGTGGAATTTGACAGGGCCATTGCGCGGGCGGCTGAGCTGACAAGTGAACTTGACACCTTGTCCGTGGTGACTGCTGACCATTCCCATGTGTTTTCTTTTGGTGGTTACTCTTACAGGGGCAATCCTGTGCTAGGCACTTCCTATTCAAAAGCTGAAGATGGTAAGAGCTTTACTAATGCACTTTATGGAAATGGTCCAGGATACCCGTATGGAACTCGTCCTGACATGAATGACACAATCTCAAGCAGTGATGAATATCTTCAGCAGGCTGCTGTACCTCTTGATTCAGAAACTCATGGTTCTGAGGATGTTGCAATTTTTGCCAAAGGACCAATGGCCCACCTCTTCCACGGAGTCCAAGAGCAGAGTTACATACCTCATGCTATGGCTTACGCTGCCTGTATTGATCCATACACTGAGTGCCTGCTAGAAAACTCTGGACATCTATGCACTCAGTTCAGCCTTCTGGTTCTGATGTTGAGCTTGCTGTCCTCACTCACAGCCCTAATATAATGTGACTAAAGGGGGGTGAGGTGCACTTAATATAGCATGCTTGTACATCACAATACATTTGCACATTTTTCCAATCCAGCTGCAACATTATCTAGACAACTGGAAAGTAGGATGACTTCTTCTACACTGTTTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_02776634_02783843.mRNA True 2422 mRNA 0.43 10 2775890 2783979

Neighbor

gene id symbol gene type direction distance location
CI01000015_02761141_02775710 NA coding upstream 63 2761051 ~ 2775827 (+)
CI01000015_02512276_02523824 NA coding upstream 251318 2511546 ~ 2524572 (+)
CI01000015_02475219_02478793 B3GNT7 coding upstream 297034 2474987 ~ 2478856 (+)
CI01000015_02452032_02454972 NA coding upstream 320797 2451584 ~ 2455093 (+)
CI01000015_02428969_02441818 NA coding upstream 333467 2428969 ~ 2442423 (+)
CI01000015_02800104_02818680 NA coding downstream 16125 2800104 ~ 2819375 (+)
CI01000015_02826599_02827203 NA coding downstream 41924 2825903 ~ 2827255 (+)
CI01000015_02846943_02876819 ACAP2 coding downstream 62964 2846943 ~ 2876819 (+)
CI01000015_02905712_02913298 HTR2B coding downstream 121458 2905437 ~ 2913590 (+)
CI01000015_02969241_02987416 TTC14 coding downstream 185262 2969241 ~ 2987695 (+)
G88577 NA non-coding upstream 192240 2583448 ~ 2583650 (+)
G88576 NA non-coding upstream 192988 2582701 ~ 2582902 (+)
G88345 NA non-coding upstream 207541 2568015 ~ 2568349 (+)
G88343 NA non-coding upstream 210432 2565258 ~ 2565458 (+)
G88172 NA non-coding upstream 249380 2384016 ~ 2526510 (+)
G88671 NA non-coding downstream 106089 2890068 ~ 2899011 (+)
G88693 NA non-coding downstream 123799 2907778 ~ 2909634 (+)
G88712 NA non-coding downstream 263461 3047440 ~ 3172378 (+)
G88745 NA non-coding downstream 401858 3185837 ~ 3186144 (+)
G88746 NA non-coding downstream 402175 3186154 ~ 3186396 (+)
G87972 NA other upstream 899296 1876004 ~ 1876594 (+)
G87432 NA other upstream 1164503 1611083 ~ 1611387 (+)
CI01000015_03011472_03026518 NA other downstream 239017 3011472 ~ 3026636 (+)
G89822 NA other downstream 1507867 4291846 ~ 4314351 (+)
G90622 NA other downstream 2430317 5203697 ~ 5400121 (+)
CI01000015_05409997_05413784 NA other downstream 2624387 5409997 ~ 5413845 (+)
G90777 NA other downstream 3120115 5744146 ~ 5907461 (+)

Expression


Co-expression Network