CI01000015_01688642_01691631


Basic Information

Item Value
gene id CI01000015_01688642_01691631
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 1688642 ~ 1691941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_01688642_01691631.mRNA
GACTCACCTTCATAATATCATCCATCATAATATCACCGATTATCTCCACAGAGCCTATCCCAACCACAGTTTCAATATCAGAGCCCACCGCAGACCCAGAGCTGAAGCTGATGCCGCCATGGACCCAGTGCCAGAGCCGATGCCCTCTACGGAGCCAGTGCCTGCAGCCATGGCCGTCAGGGAGTTTCAGCAGTCTGACCAGGTGTGCGAGTTGGTTCTCTCCTGTGCCTGTGAGAAAATTAGAAAGCCAGATAAGGAAGAGTATAGTCAGCTTCACCCTTCAGGAGAGTGGTGTTTCCTAGGCAGAAATAATCAATGTTCAGGTTTCCTCCTGTTTCTAATCTCTTCCTCCTCCACTGGTTATACGGTGGCTGCGACTGCTATAGCTCCTCCCAAAGTGGCAACGACCACTGTAGCTCCTCCTGAGGTGCCAGCATCTGTTATAGCTCCTCCCAGTGCAGAGTTTTTATATAAGGCGTTGTCCAGCTGTGCACCAAGTGTTGCTATAAACCAAAGGATGATCGGGCCTTTTCTGTGGTTGGGCCCAAGCTTTGGAATAGTCTCCCCTATCATGTGAGGTCTGCTCCTGTCAGAGATCGGCCAGGCTCCATCACCACCCAGTCACAGAGATCACAATCACCTCACCTCACATCACCTCAACATCACTGCAGCAATTAAGCACACACGAAGCACTGGCACTTTGTCTGGTCTCGCTTTAGAGTGTGACTGACTTACCTGCATTACTTACCGTCATGCATCGTTGATCCATCGTCTTCCCTGATCCTCCATGTCTCCAGTGTCTCCCTGATCGTCTGTGTCTCCAATGTCTTCATCTCCATACTCCATTGAAGTGTGTGCCCTGCCTGTTTGCTTACCTGCCACCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_01688642_01691631.mRNA True 887 mRNA 0.51 4 1688642 1691941

Neighbor

gene id symbol gene type direction distance location
CI01000015_01638133_01646368 HYKK.2, HYKK coding upstream 42233 1635426 ~ 1646409 (+)
CI01000015_01580548_01582805 TCTEX1D2 coding upstream 105564 1580548 ~ 1583078 (+)
CI01000015_01412031_01434518 RUBCN coding upstream 254124 1412031 ~ 1434518 (+)
CI01000015_01405454_01407722 NA coding upstream 279907 1404981 ~ 1409173 (+)
CI01000015_01349369_01366864 ZNRF4, RNF13 coding upstream 321131 1349369 ~ 1367511 (+)
CI01000015_02012379_02029276 EPHB3 coding downstream 320438 2012379 ~ 2029701 (+)
CI01000015_02268895_02277023 NA coding downstream 576674 2268615 ~ 2277083 (+)
CI01000015_02366085_02370003 NA coding downstream 673773 2365714 ~ 2370475 (+)
CI01000015_02419171_02421041 NA coding downstream 727043 2418984 ~ 2421794 (+)
CI01000015_02428969_02441818 NA coding downstream 737028 2428969 ~ 2442423 (+)
G87468 NA non-coding upstream 16181 1672238 ~ 1672461 (+)
G87459 NA non-coding upstream 24054 1664369 ~ 1664588 (+)
G87442 NA non-coding upstream 40473 1646660 ~ 1648169 (+)
G87435 NA non-coding upstream 74702 1613662 ~ 1613940 (+)
G87425 NA non-coding upstream 109233 1579056 ~ 1579409 (+)
G87487 NA non-coding downstream 18032 1709973 ~ 1710185 (+)
G87496 NA non-coding downstream 33092 1725033 ~ 1725264 (+)
G87490 NA non-coding downstream 34365 1726306 ~ 1728618 (+)
G87501 NA non-coding downstream 48930 1740871 ~ 1741085 (+)
G87989 NA non-coding downstream 211946 1903887 ~ 1904207 (+)
G87432 NA other upstream 77255 1611083 ~ 1611387 (+)
G87972 NA other downstream 184063 1876004 ~ 1876594 (+)
G88172 NA other downstream 692075 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 820157 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 1331055 3011472 ~ 3026636 (+)
G89822 NA other downstream 2599905 4291846 ~ 4314351 (+)

Expression


Co-expression Network