G87468


Basic Information

Item Value
gene id G87468
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 1672238 ~ 1672461 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU99599
ATTTAGGTTTATACATAGTTTCCAAGACAGAGTTCAAGATAAATATTTTCATCTTACTACTAGAGCTGCCAGTTTGCTACGTTTCAAAATGATTATTAAACAGCAAGCACAAACTATGTAAAACACTCAGTGTCCGAATTCACTCACTTGTTTTCATTCACTCCTTCAGGTGGACTATATTAAGTGGGGTAATGTAGGGAATAGTGAATGTGGGTATATGGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99599 True 224 lncRNA 0.36 1 1672238 1672461

Neighbor

gene id symbol gene type direction distance location
CI01000015_01638133_01646368 HYKK.2, HYKK coding upstream 25829 1635426 ~ 1646409 (+)
CI01000015_01580548_01582805 TCTEX1D2 coding upstream 89160 1580548 ~ 1583078 (+)
CI01000015_01412031_01434518 RUBCN coding upstream 237720 1412031 ~ 1434518 (+)
CI01000015_01405454_01407722 NA coding upstream 263503 1404981 ~ 1409173 (+)
CI01000015_01349369_01366864 ZNRF4, RNF13 coding upstream 304727 1349369 ~ 1367511 (+)
CI01000015_01688642_01691631 NA coding downstream 16181 1688642 ~ 1691941 (+)
CI01000015_02012379_02029276 EPHB3 coding downstream 339918 2012379 ~ 2029701 (+)
CI01000015_02268895_02277023 NA coding downstream 596154 2268615 ~ 2277083 (+)
CI01000015_02366085_02370003 NA coding downstream 693253 2365714 ~ 2370475 (+)
CI01000015_02419171_02421041 NA coding downstream 746523 2418984 ~ 2421794 (+)
G87459 NA non-coding upstream 7650 1664369 ~ 1664588 (+)
G87442 NA non-coding upstream 24069 1646660 ~ 1648169 (+)
G87435 NA non-coding upstream 58298 1613662 ~ 1613940 (+)
G87425 NA non-coding upstream 92829 1579056 ~ 1579409 (+)
G87423 NA non-coding upstream 95751 1576200 ~ 1576487 (+)
G87487 NA non-coding downstream 37512 1709973 ~ 1710185 (+)
G87496 NA non-coding downstream 52572 1725033 ~ 1725264 (+)
G87490 NA non-coding downstream 53845 1726306 ~ 1728618 (+)
G87501 NA non-coding downstream 68410 1740871 ~ 1741085 (+)
G87989 NA non-coding downstream 231426 1903887 ~ 1904207 (+)
G87432 NA other upstream 60851 1611083 ~ 1611387 (+)
G87972 NA other downstream 203543 1876004 ~ 1876594 (+)
G88172 NA other downstream 711555 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 839637 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 1350535 3011472 ~ 3026636 (+)
G89822 NA other downstream 2619385 4291846 ~ 4314351 (+)

Expression


Co-expression Network