G59815


Basic Information

Item Value
gene id G59815
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 48761245 ~ 48822839 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU80627
acttttttcctgattatttcattacattttacttgactaactatctttatctttgacagtgttgtgtaaactaagattcaaattgatgtttaatttcatgatgtctcttaatattaaactccttaattacggcaacttttagactctttggcgcgtttttctgcgctacaactgagcactctctccgcttttagactctttggcccgtttttctgcgctacaactgcgcaccctctccgcttttagactctttggcccgtttttctgcgctacaactgcgcaccctctccacttttagactctttggcccgtttttctgcgctacaactgcgcaccctctccgcttttagactctttggcccgtttttctgcgctacaactgcgcaccctctccgcttttagactctttggcccgtttttctgcgctacaactgaacaccctctccacttttagactctttggcccgtttttctgcgctacaactgagcactctctccgcttttagactctttggcccgtttttctgcgctacaactgcgcaccctctccgcttttagactctttggcccgtttttctgcgctaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80627 True 586 lncRNA 0.46 3 48761245 48822839

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC108411772,LOC107693599,LOC107553896,LOC107750813 coding downstream 253053 48489929 ~ 48508192 (-)
lrtm1 lrtm1 coding downstream 411876 48329753 ~ 48349369 (-)
LOC103032709 LOC108411942 coding downstream 817249 47936506 ~ 47943996 (-)
actr8 actr8,LOC107594971 coding downstream 850433 47895626 ~ 47910812 (-)
chdh chdh coding downstream 882128 47861633 ~ 47879117 (-)
tlr9 NA coding upstream 89149 48911988 ~ 48917131 (-)
apeh apeh,LOC107730641,LOC105013991 coding upstream 94943 48917782 ~ 48937325 (-)
LOC103035796 bsn,LOC108265177,LOC107698426 coding upstream 116898 48939737 ~ 48971138 (-)
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding upstream 532698 49355537 ~ 49420407 (-)
LOC103029024 LOC108411638,LOC107603148 coding upstream 792482 49615321 ~ 49623205 (-)
G59809 NA non-coding downstream 239036 48520483 ~ 48522209 (-)
G59773 NA non-coding downstream 240935 48519003 ~ 48520310 (-)
G59769 NA non-coding downstream 326956 48433944 ~ 48434289 (-)
G59752 NA non-coding downstream 433980 48322221 ~ 48327265 (-)
G59744 NA non-coding downstream 756073 48004442 ~ 48005172 (-)
G59823 NA non-coding upstream 85441 48908280 ~ 48908811 (-)
G59827 NA non-coding upstream 157826 48980665 ~ 48981136 (-)
G59856 NA non-coding upstream 214834 49037673 ~ 49038066 (-)
LOC111192741 NA non-coding upstream 218405 49041244 ~ 49043009 (-)
G59862 NA non-coding upstream 222399 49045238 ~ 49045987 (-)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other downstream 841831 47816355 ~ 47919414 (-)
LOC111192697 NA other downstream 1309853 47448958 ~ 47451392 (-)
LOC103040795 LOC108412055,LOC108265574,LOC105899021,LOC108412246 other downstream 1346811 47196651 ~ 47414434 (-)
LOC103023429 LOC103023429,LOC108442352,LOC108265644,LOC107594970,LOC107549568,LOC107684464 other downstream 2079320 46603244 ~ 46681925 (-)
G59341 NA other downstream 2574351 46182741 ~ 46186894 (-)
LOC103030200 cacna1e,LOC108265205,LOC108265123,LOC108265206 other upstream 239680 49062519 ~ 49192025 (-)
G59951 NA other upstream 481769 49304608 ~ 49305252 (-)
LOC103046211 ski,skia,LOC108410624,LOC107599811,LOC107657901,LOC107699765,LOC107548407 other upstream 1742450 50565289 ~ 50630164 (-)
G60441 NA other upstream 2004856 50827695 ~ 50832200 (-)
LOC103032656 LOC108413501 other upstream 2593381 51416220 ~ 51508580 (-)

Expression


Co-expression Network