XLOC_000795 (si:ch211-1f22.10)


Basic Information

Item Value
gene id XLOC_000795
gene name si:ch211-1f22.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 56955349 ~ 56960001 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001279
AGTTGCTGTTGATCGGCTGCTCTTCAACACGATAGATTTGATGCTGATGTGGCTCAGAAtggctcctgctcttcatctgatCTTTCTGCTCATCATTCACAGGGTTTCTGCTGCTAGTTGGGGTGTGaaatacagtactttaaaaatctGTGCACTACAGAACTCAACAATTACAATCAGCTGCACTTTTACATACCCGACTACTGTACATCAGATCATGAAAGTGTTTTGGACCAAAGATGTAAATGGTTTTCCAGATCTGTCTGTGGACCCTGAATACAGTCAGAGGCTTCAGTATCTGGGAGATAAACAGCAGATCTGCACTGTCCGACTGAGTCATGTGACAAAGAAAGATGAACACCAGTATTACTTCAGATTCATTACTGATCAAAATGGAGGGAAATGGACAGGCACTCCAGGAGTGCGTCTCTCAGTCACAGatcTTCAGCTGGAGTCTCCTGAGAGAGTGACAGAGGGAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGTAAACTGACTGACACACCAACATTCATCTGGTACAGAAACTCACACACATTGACTAATATTGGAGATGAACTCAACATCAGTTCAGTCAGTAGAACAGAAGCAGGACACTACAGCTGTGGTGTGCAGAAATACAACTACATCTCTCCTGCTGTTTATCTCAATGTCAGATATGCTCCAGATACTCCTGTGATCTCCAACAGATCTGCTGTAATAATGGAGGGAGATTCAGTGATCCTGAACTGCAGcagtgactcaaaccctcctgcaaACTTCAGCTGGTTTAAAGGAAATACATCTCTGAATTTCGGAGGAATCTTCAGCATCTCCAAGATCAGCTCTGATGACAGCGGAAAATACAAGTGTAGAGCCAAAAATTATCTTGGAGAGAAATCCTCTGATCCTGTGACTTTAGATGTCCAGTACCCACCCAGGAACATCTCAGTGTCTATGAATAGATCTGCTGTAATAGTGGagggagattcagtgactctgaactgcagcagcgactcaaaccctcctgctctGATCTTCAACtggtttaaagaaaataaatctctGAATTCTGGAAGAATCTTCAACATCTTTAAGATCAGCTCTGatgacagtggagaatacaagtgTAGAGCCAGAAATGACCATGGAGAGAAATACTCTGATCCTGTGACTTTAGATGTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096619

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001279 True 1186 mRNA 0.43 6 56955349 56960001

Neighbor

gene id symbol gene type direction distance location
XLOC_000794 NA coding upstream 10960 56939347 ~ 56944389 (+)
XLOC_000793 si:ch211-152f2.4 coding upstream 22771 56929873 ~ 56932578 (+)
XLOC_000792 si:ch211-1f22.9 coding upstream 33189 56919742 ~ 56922160 (+)
XLOC_000791 si:ch211-152f2.3 coding upstream 50539 56900580 ~ 56904810 (+)
XLOC_000790 si:ch211-1f22.8 coding upstream 61994 56886214 ~ 56893355 (+)
XLOC_000796 si:ch211-1f22.11 coding downstream 12615 56972616 ~ 56981521 (+)
XLOC_000797 si:ch211-1f22.12 coding downstream 32261 56992262 ~ 56996143 (+)
XLOC_000798 si:ch211-1f22.13 coding downstream 44177 57004178 ~ 57008386 (+)
XLOC_000799 si:ch211-1f22.16 coding downstream 80471 57040472 ~ 57045514 (+)
XLOC_000800 si:ch211-1f22.14 coding downstream 90898 57050899 ~ 57059786 (+)
XLOC_000783 NA non-coding upstream 55061 56819153 ~ 56900288 (+)
XLOC_000788 NA non-coding upstream 76715 56873097 ~ 56878634 (+)
XLOC_000787 NA non-coding upstream 97884 56851035 ~ 56857465 (+)
XLOC_000785 BX927068.1 non-coding upstream 121347 56830798 ~ 56834002 (+)
XLOC_000801 NA non-coding downstream 156264 57116265 ~ 57120505 (+)
XLOC_000809 NA non-coding downstream 254292 57214293 ~ 57214954 (+)
XLOC_000815 NA non-coding downstream 448666 57408667 ~ 57436117 (+)
XLOC_000816 NA non-coding downstream 459347 57419348 ~ 57433416 (+)
XLOC_000818 NA non-coding downstream 581115 57541116 ~ 57565236 (+)

Expression


Co-expression Network