G95845


Basic Information

Item Value
gene id G95845
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5256601 ~ 5258167 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109006
GTCGATTTCTCGTGCAAATTCTTTGACTGCCTCACTGGGGTCTTCGTAAGTAGAGGGATCCACATAATATTTCACCCCACCTCTGTTGCTCATGTATCTCTGAAGTCTGTCACTATAGGGGCTCTCTCTCCTTTTACTTCGAAACACAAACACAATGATGATGGCTATCACAACCAATAGAAATGCTGCTCCGCCCATTACTGATCCGATCATAAGGGGCAGGCGATTTTGAATCTGCTTTGACTGTTCCTCCATTGCTAGAGTGCTGAAGTAAATAGTGTGGCTGTAGGGCCCGTAGCCTCTCTCGTTTCGAGCACGGATCTGGAAGGCATAGATGGAGCCTGGAATCAGACCTCCAACTGTCACTGTGTTTGTTTCACTGAAGACGCTCACAGCACTGTCCTCATCAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109006 True 414 lncRNA 0.48 4 5256601 5258167

Neighbor

gene id symbol gene type direction distance location
CI01000016_05229439_05231984 NA coding upstream 23442 5229339 ~ 5233159 (+)
CI01000016_05192890_05204267 TPI1.S, TPI1, TPI, TPI1B, TPI1A coding upstream 51842 5192782 ~ 5204759 (+)
CI01000016_05117302_05122058 GNB3A, GNB3 coding upstream 133889 5115426 ~ 5122712 (+)
CI01000016_05100744_05111181 P3H3 coding upstream 145212 5100744 ~ 5111389 (+)
CI01000016_05064542_05068162 NA coding upstream 187791 5062914 ~ 5068810 (+)
CI01000016_05335334_05352325 RASIP1 coding downstream 77167 5335334 ~ 5352667 (+)
CI01000016_05381573_05383796 NA coding downstream 122750 5380917 ~ 5383818 (+)
CI01000016_05388832_05396460 ZNF628 coding downstream 130665 5388832 ~ 5397080 (+)
CI01000016_05398036_05400369 NAT14 coding downstream 139869 5398036 ~ 5400406 (+)
CI01000016_05405791_05407797 AICDA coding downstream 147624 5405791 ~ 5407963 (+)
G95737 NA non-coding upstream 50474 5203887 ~ 5206127 (+)
G95785 NA non-coding upstream 128708 5124224 ~ 5127893 (+)
G95731 NA non-coding upstream 165592 5060171 ~ 5091009 (+)
G95726 NA non-coding upstream 168044 5056996 ~ 5088557 (+)
G95751 NA non-coding upstream 276288 4980101 ~ 4980313 (+)
G95814 NA non-coding downstream 69444 5327611 ~ 5329658 (+)
G95824 NA non-coding downstream 113161 5371328 ~ 5375267 (+)
G95871 NA non-coding downstream 153315 5411482 ~ 5411703 (+)
G95803 NA non-coding downstream 154071 5412238 ~ 5418215 (+)
G95876 NA non-coding downstream 163000 5421167 ~ 5421768 (+)
G95792 NA other upstream 30660 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 419946 4829592 ~ 4837457 (+)
G95648 NA other upstream 982696 4272636 ~ 4273905 (+)
G95439 NA other upstream 1392744 3862175 ~ 3862305 (+)
G93406 NA other upstream 4329069 905400 ~ 927532 (+)
G96389 NA other downstream 1902474 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2525898 7783987 ~ 7784996 (+)
G97824 NA other downstream 2756196 8014363 ~ 8015775 (+)
G98288 NA other downstream 3737931 8996098 ~ 9002717 (+)

Expression


Co-expression Network