G95785


Basic Information

Item Value
gene id G95785
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5124224 ~ 5127893 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108937
TGTTAAATTTTATTTACATTAAAAAAAAGACAGTGTTTATTTACAAACACACATAGAAACAGTAGAAGAATGGAAAAAAAGAATAATCATGTAGTTTAAGGCTAAAAACTGTAGTATATACATAGTGTTGGCTGGATTTATCCTGGTTTTCCCAGTTTGTTTCACTCATTCTCCTTGTTGAGTGACAGAATCAGAGCTCTCCTGTCCATCTGGCTGAATCTCTGTTTTTCAGGGGTGGACACTTTCAGCTTCATCTGTAAATTGCGGTCTCTGGGTGAATTAGCCTCCCTCAGGATCTGCAGAGGCGATCTGCCCTCACCAATCAAAACTTTTTCTCTCGGTCTTTGTTTGGCGCGCACAACCATGTTGTTATTCTCATTTGTGGCTGTGTTTTTGGTGGAGAGCGGTGAAGAGACAGAGGTTTTTCCACGTCCCTGTACCCCTCTTGCTCTGACACCAGCGGTCCCGAAGCCCACCCCCAACCACTGGGGTTTAAAAATGGCTTGACTGGGGCTGCGGGTGTCAAACTTCAGACAACGGATGCCAGACTGGACCGTTTCGACCTGGGTGCTGGTCACAGGGCTGGATTTGCTGGATGCAACAGCCGGTTGAGGTGTGAGAGGTTTGCTCACCTCTGGCTGCTCATGGCTCGACTCTGGAAGAGCAGCTGTGACCTGTTCTTCAGACATCTGGGATGTAACCTCAGCTTCCTCCAGGGTCACAACAGCTTCAGCAACAGGCGTGGACGTTTCAGACTCTGTGGACTGTTGGGCGACTGAAAAGAGTGCGTAAGAATGATCTTCATTCGCTTGCCTCTCAGCAGGAGGAAGAGGAGTCAGAGGACGTTCCTCCAGAGAAGAGGAGTAAACACCTTCACGACATGCAAGAAGACTCAAACTAAGCTCTTTCTTTAAAGGCGAAGCACCAAGCAGCAGAGCCTCCTCTGCCTCTTCCAGCGAGGCTTCAGTATCTACCTCTACCTCCATCTGTGTGTCTCCAATCAACACAAACGGGCTGCTGCAAATGGAACCGTAGCCCTCAGAAGGAGAGGACGCCACAGGAGCGAACACGGCATCTGTGCATTCGCGGACGGAGGCTGAGTTCTGAGCTTTTACCACAGGGAGCAGGGGCTCTCTGGGGCCTGTTTCATTTTGCCGAGCCACATTGGGCAGGCTGGGGTGTTTGGTAAAGGAGACCGGAGGAAGAGTCGAAACAGAGTCGCCACCAGACTTAACATCATTGAGAAAGAAGGTGCTCAGTCGCCGGGCGAGAGATGTGACGCTCACTGTAAAGGAGACAAAGGAGTTTGAGATTAAAGATCTATTTTATAAATGCATGTTGTTGATCTTATTGTGAACTATTAATCCATGCATGTTTCATTTTAAAATTTCTTTTTAAAAAAATTGACAATGTAATTTTTAAACAAAACTTCGGCCCCTTTCTTACAACCAACTACAAGCTACAATTCATATCTGCCTCCATCCAATCAACTACTAATGGAGAGATCTAAATCCCCACCCTGCATTTTCTTTTTTCTTTTTTTTTTATTGATCATTTTTCCTCTCTCGGATGTACGTCAGAAAGAAGAAAAGATATCTCACTACTTAAATCACAATTTAAAATGGCAGGGCTGATTCACTAGAGTACAACAGATTCTGGAATTAAAAATCATTTATTTTCTCCACAGGGAAACTGATTTTTAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108937 True 1704 lncRNA 0.45 4 5124224 5127893

Neighbor

gene id symbol gene type direction distance location
CI01000016_05117302_05122058 GNB3A, GNB3 coding upstream 1512 5115426 ~ 5122712 (+)
CI01000016_05100744_05111181 P3H3 coding upstream 12835 5100744 ~ 5111389 (+)
CI01000016_05064542_05068162 NA coding upstream 55414 5062914 ~ 5068810 (+)
CI01000016_04981918_04985412 NA coding upstream 138589 4981610 ~ 4985635 (+)
CI01000016_04969263_04970446 CXCR3.2 coding upstream 153592 4968502 ~ 4970632 (+)
CI01000016_05192890_05204267 TPI1.S, TPI1, TPI, TPI1B, TPI1A coding downstream 64889 5192782 ~ 5204759 (+)
CI01000016_05229439_05231984 NA coding downstream 101446 5229339 ~ 5233159 (+)
CI01000016_05335334_05352325 RASIP1 coding downstream 207441 5335334 ~ 5352667 (+)
CI01000016_05381573_05383796 NA coding downstream 253024 5380917 ~ 5383818 (+)
CI01000016_05388832_05396460 ZNF628 coding downstream 260939 5388832 ~ 5397080 (+)
G95731 NA non-coding upstream 33215 5060171 ~ 5091009 (+)
G95726 NA non-coding upstream 35667 5056996 ~ 5088557 (+)
G95751 NA non-coding upstream 143911 4980101 ~ 4980313 (+)
G95718 NA non-coding upstream 161638 4962250 ~ 4962586 (+)
CI01000016_04932388_04935392 NA non-coding upstream 188466 4931929 ~ 4935904 (+)
G95737 NA non-coding downstream 75994 5203887 ~ 5206127 (+)
G95793 NA non-coding downstream 105303 5233196 ~ 5325915 (+)
G95844 NA non-coding downstream 128622 5256515 ~ 5256900 (+)
G95845 NA non-coding downstream 128708 5256601 ~ 5258167 (+)
G95814 NA non-coding downstream 199718 5327611 ~ 5329658 (+)
CI01000016_04829592_04837305 NA other upstream 287569 4829592 ~ 4837457 (+)
G95648 NA other upstream 850319 4272636 ~ 4273905 (+)
G95439 NA other upstream 1260367 3862175 ~ 3862305 (+)
G93406 NA other upstream 4196692 905400 ~ 927532 (+)
G95792 NA other downstream 91987 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 277976 5405791 ~ 5407963 (+)
G96389 NA other downstream 2032748 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2656172 7783987 ~ 7784996 (+)
G97824 NA other downstream 2886470 8014363 ~ 8015775 (+)

Expression


Co-expression Network