G95888


Basic Information

Item Value
gene id G95888
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5496643 ~ 5496842 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109055
CTTTTTCCATGCAATTACAATCAAAAAAGAATGCAAAAGCACTATAAAACGATCTTAAAAGTGGTTCATATAAAACATAAGCTATGTTTCCTGTCCTGAATTCATTCATACAATAATTTTACAGAAATTTAAGTTATTATTCACTGAAAATCTCCCACCAGTGAACTGTTTACTGTTAGTAAGTTAAACTCAAGATGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109055 True 200 lncRNA 0.30 1 5496643 5496842

Neighbor

gene id symbol gene type direction distance location
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding upstream 12697 5475350 ~ 5483946 (+)
CI01000016_05445824_05454816 EPN1 coding upstream 41227 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 88680 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 96237 5398036 ~ 5400406 (+)
CI01000016_05388832_05396460 ZNF628 coding upstream 99563 5388832 ~ 5397080 (+)
CI01000016_05698858_05706081 NA coding downstream 202016 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 300664 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 331556 5828398 ~ 5833377 (+)
CI01000016_05837368_05837667 NA coding downstream 339741 5836583 ~ 5837927 (+)
CI01000016_05878037_05885761 FLCN coding downstream 381195 5878037 ~ 5886192 (+)
G95831 NA non-coding upstream 1729 5494241 ~ 5494914 (+)
G95804 NA non-coding upstream 29660 5466670 ~ 5466983 (+)
G95885 NA non-coding upstream 33386 5463028 ~ 5463257 (+)
G95884 NA non-coding upstream 33719 5462718 ~ 5462924 (+)
G95805 NA non-coding upstream 34501 5461890 ~ 5462142 (+)
G95889 NA non-coding downstream 1426 5498268 ~ 5498957 (+)
G95890 NA non-coding downstream 2516 5499358 ~ 5499655 (+)
G95891 NA non-coding downstream 2948 5499790 ~ 5500142 (+)
G95892 NA non-coding downstream 3575 5500417 ~ 5500794 (+)
G95893 NA non-coding downstream 3986 5500828 ~ 5501124 (+)
G95792 NA other upstream 270702 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 659988 4829592 ~ 4837457 (+)
G95648 NA other upstream 1222738 4272636 ~ 4273905 (+)
G95439 NA other upstream 1632786 3862175 ~ 3862305 (+)
G96389 NA other downstream 1663799 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2287223 7783987 ~ 7784996 (+)
G97824 NA other downstream 2517521 8014363 ~ 8015775 (+)
G98288 NA other downstream 3499256 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4298789 9795950 ~ 9842576 (+)

Expression


Co-expression Network