G103308


Basic Information

Item Value
gene id G103308
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1650625 ~ 1650927 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117525
AACATGACAATGATCCTAAACACACATCTAAGGCCACTGTTGGATTTCTGAAGAAGAACGGGTGAAAGTGATTCAGTGGCTCCTGATCTGAACCCAATCGAACACCTATGGGGAATTCTGAAGAGACAAGTTGAGCATCACTCTCCATCCAGCATCCAGTCTCTAAAAGAGGTCATTCTTGAAGAATGGAAAAAGATAGATGTTGCAAAATGTCGCCAACTTGTTCATTCCATGCCTAGAAGACTTGGTGCTGTCATTAAAAATCACAGAGGCCATACAAACTACTAGATGTTTTTGTTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117525 True 303 lncRNA 0.42 1 1650625 1650927

Neighbor

gene id symbol gene type direction distance location
CI01000018_01588236_01598892 NA coding upstream 51375 1588033 ~ 1599250 (+)
CI01000018_01378078_01379655 SOCS6 coding upstream 270947 1377567 ~ 1379678 (+)
CI01000018_01237799_01262508 DOK6 coding upstream 388117 1237799 ~ 1262508 (+)
CI01000018_01162096_01176494 CRISPLD1A coding upstream 473885 1162096 ~ 1176740 (+)
CI01000018_01130413_01157978 PI15A, PI15 coding upstream 492626 1129786 ~ 1157999 (+)
CI01000018_01709643_01800520 NETO1, NETO1L coding downstream 58716 1709643 ~ 1800520 (+)
CI01000018_01815173_01819759 NA coding downstream 164246 1815173 ~ 1820017 (+)
CI01000018_01821013_01821973 NA coding downstream 169451 1820378 ~ 1822344 (+)
CI01000018_01900038_01904335 NA coding downstream 249111 1900038 ~ 1904406 (+)
CI01000018_01924489_01985310 SEMA5A coding downstream 273562 1924489 ~ 1985311 (+)
G103284 NA non-coding upstream 12957 1637467 ~ 1637668 (+)
G103265 NA non-coding upstream 27124 1622769 ~ 1623501 (+)
G103264 NA non-coding upstream 28044 1622342 ~ 1622581 (+)
G102797 NA non-coding upstream 50033 1600282 ~ 1600592 (+)
G102793 NA non-coding upstream 95080 1455885 ~ 1555545 (+)
G103323 NA non-coding downstream 25490 1676417 ~ 1676695 (+)
G103329 NA non-coding downstream 35610 1686537 ~ 1686922 (+)
G103330 NA non-coding downstream 36525 1687452 ~ 1687749 (+)
G103375 NA non-coding downstream 236259 1887186 ~ 1887450 (+)
G103382 NA non-coding downstream 305671 1956598 ~ 1956914 (+)
G102895 NA other upstream 64963 1582913 ~ 1585662 (+)
G104258 NA other downstream 2040162 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2719259 4368179 ~ 4375866 (+)
G104670 NA other downstream 3104874 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 3565753 5216452 ~ 5222616 (+)

Expression


Co-expression Network