CI01000018_01900038_01904335


Basic Information

Item Value
gene id CI01000018_01900038_01904335
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1900038 ~ 1904406 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_01900038_01904335.mRNA
AAATCGAGCCTTGGATCCATCGGTTTAGAGCAGAGGGCACTGTTGATTATTCACAGCTGACCTTTGACCCAGGCCAGAACGAACTAATCGTGGGCGCAAGGACTTTTGTGGCAGACAAAGAACAGCATAGAGCCTACTCACCAACAGATACTTTCATAAAAATATCGCACCATGAATCTGTGAAGAGGAAAACGAAAGTCTTGTCTTGGTTGAACTCCATGATGCTTTCGGCTCGACTGGTTATCCCTGGAGCAGATGGGTTTTCAGTGCTCAAGGCCTCAGAAACACACCCACAGCCTGGCCTAATGGACTGTGCAAAGGTTCTCCAGCTGAGCTGCTGCTTCATCAAGGTCACTGAACAACAGGGTTCTCGTGGAGATGCGCAGCAGCTCAAGGAAGATTTCTGCCAATTACCAACACCAGACTGAGCAGACCTGTCAAAGTACATACACTTAGAATGTGGAATGTTGAATCATGCCTCAAGCTTGCTGGTCATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_01900038_01904335.mRNA True 499 mRNA 0.48 3 1900038 1904406

Neighbor

gene id symbol gene type direction distance location
CI01000018_01821013_01821973 NA coding upstream 77694 1820378 ~ 1822344 (+)
CI01000018_01815173_01819759 NA coding upstream 80021 1815173 ~ 1820017 (+)
CI01000018_01709643_01800520 NETO1, NETO1L coding upstream 99518 1709643 ~ 1800520 (+)
CI01000018_01588236_01598892 NA coding upstream 300788 1588033 ~ 1599250 (+)
CI01000018_01378078_01379655 SOCS6 coding upstream 520360 1377567 ~ 1379678 (+)
CI01000018_01924489_01985310 SEMA5A coding downstream 20083 1924489 ~ 1985311 (+)
CI01000018_02072273_02080049 CCT5.S, CCT5B, TCPE, CCT5 coding downstream 167827 2072233 ~ 2080153 (+)
CI01000018_02104142_02113293 EIF2S3L, EIF2S3.S, IF2G, EIF2S3Y, EIF2S3X, EIF2S3 coding downstream 199297 2103703 ~ 2113546 (+)
CI01000018_02115961_02124173 ZFX coding downstream 211555 2115961 ~ 2124841 (+)
CI01000018_02150486_02181595 PIP4K2AA, PIP4K2AB, PIP4K2A coding downstream 246080 2150486 ~ 2181619 (+)
G103375 NA non-coding upstream 12588 1887186 ~ 1887450 (+)
G103330 NA non-coding upstream 212289 1687452 ~ 1687749 (+)
G103329 NA non-coding upstream 213116 1686537 ~ 1686922 (+)
G103323 NA non-coding upstream 223343 1676417 ~ 1676695 (+)
G103308 NA non-coding upstream 249111 1650625 ~ 1650927 (+)
G103382 NA non-coding downstream 52192 1956598 ~ 1956914 (+)
G103383 NA non-coding downstream 52623 1957029 ~ 1957529 (+)
G103384 NA non-coding downstream 53383 1957789 ~ 1958018 (+)
G103385 NA non-coding downstream 53857 1958263 ~ 1958519 (+)
G103386 NA non-coding downstream 55294 1959700 ~ 1959986 (+)
G102895 NA other upstream 314376 1582913 ~ 1585662 (+)
G104258 NA other downstream 1786683 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2465780 4368179 ~ 4375866 (+)
G104670 NA other downstream 2851395 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 3312274 5216452 ~ 5222616 (+)

Expression


Co-expression Network