Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000018_02104142_02113293 |
| gene name | EIF2S3L, EIF2S3.S, IF2G, EIF2S3Y, EIF2S3X, EIF2S3 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 2103703 ~ 2113546 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| eif2s3 | Predicted to enable translation initiation factor activity. Predicted to contribute to tRNA binding activity. Predicted to be involved in formation of translation preinitiation complex and positive regulation of translational fidelity. Predicted to act upstream of or within translational initiation. Predicted to be part of eukaryotic translation initiation factor 2 complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in MEHMO syndrome. Orthologous to several human genes including EIF2S3 (eukaryotic translation initiation factor 2 subunit gamma). |
| eif2s3y | Predicted to enable translation initiation factor activity. Predicted to contribute to tRNA binding activity. Predicted to be involved in formation of translation preinitiation complex and positive regulation of translational fidelity. Predicted to be part of eukaryotic translation initiation factor 2 complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in MEHMO syndrome. Orthologous to several human genes including EIF2S3 (eukaryotic translation initiation factor 2 subunit gamma). |
| eif2s3x | Predicted to enable translation initiation factor activity. Predicted to contribute to tRNA binding activity. Predicted to be involved in formation of translation preinitiation complex and positive regulation of translational fidelity. Predicted to act upstream of or within translation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 2 complex. Predicted to be active in cytosol. Is expressed in several structures, including brain; diaphragm; embryo mesenchyme; liver; and skeletal musculature. Human ortholog(s) of this gene implicated in MEHMO syndrome. Orthologous to several human genes including EIF2S3 (eukaryotic translation initiation factor 2 subunit gamma). |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K03242 | EIF2S3; translation initiation factor 2 subunit 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000018_02104142_02113293.mRNA | True | 2111 | mRNA | 0.45 | 12 | 2103703 | 2113546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_02072273_02080049 | CCT5.S, CCT5B, TCPE, CCT5 | coding | upstream | 23550 | 2072233 ~ 2080153 (+) |
| CI01000018_01924489_01985310 | SEMA5A | coding | upstream | 118393 | 1924489 ~ 1985311 (+) |
| CI01000018_01900038_01904335 | NA | coding | upstream | 199297 | 1900038 ~ 1904406 (+) |
| CI01000018_01821013_01821973 | NA | coding | upstream | 281359 | 1820378 ~ 1822344 (+) |
| CI01000018_01815173_01819759 | NA | coding | upstream | 283686 | 1815173 ~ 1820017 (+) |
| CI01000018_02115961_02124173 | ZFX | coding | downstream | 2415 | 2115961 ~ 2124841 (+) |
| CI01000018_02150486_02181595 | PIP4K2AA, PIP4K2AB, PIP4K2A | coding | downstream | 36940 | 2150486 ~ 2181619 (+) |
| CI01000018_02203236_02203803 | NA | coding | downstream | 88727 | 2202273 ~ 2204218 (+) |
| CI01000018_02205930_02256958 | MLLT10 | coding | downstream | 91666 | 2205212 ~ 2256958 (+) |
| CI01000018_02260011_02260307 | NA | coding | downstream | 146356 | 2259902 ~ 2260862 (+) |
| G103347 | NA | non-coding | upstream | 20393 | 2083106 ~ 2083310 (+) |
| G103386 | NA | non-coding | upstream | 143717 | 1959700 ~ 1959986 (+) |
| G103385 | NA | non-coding | upstream | 145184 | 1958263 ~ 1958519 (+) |
| G103384 | NA | non-coding | upstream | 145685 | 1957789 ~ 1958018 (+) |
| G103383 | NA | non-coding | upstream | 146174 | 1957029 ~ 1957529 (+) |
| G103363 | NA | non-coding | downstream | 20629 | 2134175 ~ 2136567 (+) |
| G103457 | NA | non-coding | downstream | 192294 | 2305840 ~ 2306113 (+) |
| G103478 | NA | non-coding | downstream | 264376 | 2377922 ~ 2378138 (+) |
| G103479 | NA | non-coding | downstream | 264708 | 2378254 ~ 2378470 (+) |
| G103480 | NA | non-coding | downstream | 266031 | 2379577 ~ 2379869 (+) |
| G102895 | NA | other | upstream | 518041 | 1582913 ~ 1585662 (+) |
| G104258 | NA | other | downstream | 1577543 | 3691089 ~ 3691519 (+) |
| CI01000018_04368179_04375192 | NA | other | downstream | 2256640 | 4368179 ~ 4375866 (+) |
| G104670 | NA | other | downstream | 2642255 | 4755801 ~ 4759768 (+) |
| CI01000018_05217404_05218896 | NA | other | downstream | 3103134 | 5216452 ~ 5222616 (+) |
| G106429 | NA | other | downstream | 4768065 | 6881611 ~ 6886325 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
