G103480


Basic Information

Item Value
gene id G103480
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2379577 ~ 2379869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117714
TCAGTGGCTCCTGATCTGAACCCAATCGAACACCTATGGGGAATTCTGAAGAGACAAGTTGAGCATCACTCTCCATCCAGCATCCAGTCTCTAAAAGAGGTCATTCTTGAAGAATGGAAAAAGATAGATGTTGCAAAATGTCGCCAACTTGTTCATTCCATGCCTAGAAGACTTGGTGCTGTCATTAAAAATCAAGGAGGCCATACAAACTACTAGATGTAGTTTTTGTTGTGGGGTGTACTCATTTTTGCATCACCCTAATTTGAGTAAAACTGAAAATGTTGTTCTCTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117714 True 293 lncRNA 0.40 1 2379577 2379869

Neighbor

gene id symbol gene type direction distance location
CI01000018_02370124_02372215 NA coding upstream 6672 2370071 ~ 2372905 (+)
CI01000018_02344327_02354633 EZH2 coding upstream 24164 2344327 ~ 2355413 (+)
CI01000018_02338151_02342822 PDIA4 coding upstream 36688 2338151 ~ 2342889 (+)
CI01000018_02332183_02336865 NA coding upstream 42654 2332183 ~ 2336923 (+)
CI01000018_02327424_02330396 NA coding upstream 48617 2327424 ~ 2330960 (+)
CI01000018_02864151_02865976 NA coding downstream 484282 2864151 ~ 2865978 (+)
CI01000018_02868921_02905963 NA coding downstream 489052 2868921 ~ 2905990 (+)
CI01000018_03009909_03030542 CSPP1 coding downstream 630040 3009909 ~ 3030609 (+)
CI01000018_03144746_03157987 NA coding downstream 764785 3144654 ~ 3158243 (+)
CI01000018_03168822_03281088 PREX2 coding downstream 788953 3168822 ~ 3281088 (+)
G103479 NA non-coding upstream 1107 2378254 ~ 2378470 (+)
G103478 NA non-coding upstream 1439 2377922 ~ 2378138 (+)
G103457 NA non-coding upstream 73464 2305840 ~ 2306113 (+)
G103363 NA non-coding upstream 243010 2134175 ~ 2136567 (+)
G103347 NA non-coding upstream 296267 2083106 ~ 2083310 (+)
G103482 NA non-coding downstream 4236 2384105 ~ 2384329 (+)
G103483 NA non-coding downstream 4630 2384499 ~ 2385857 (+)
G103485 NA non-coding downstream 12307 2392176 ~ 2401095 (+)
G103491 NA non-coding downstream 26988 2406857 ~ 2407181 (+)
G103495 NA non-coding downstream 45873 2425742 ~ 2425971 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 394266 1924489 ~ 1985311 (+)
G102895 NA other upstream 793915 1582913 ~ 1585662 (+)
G104258 NA other downstream 1311220 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 1990317 4368179 ~ 4375866 (+)
G104670 NA other downstream 2375932 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2836811 5216452 ~ 5222616 (+)
G106429 NA other downstream 4501742 6881611 ~ 6886325 (+)

Expression


Co-expression Network