CI01000018_03144746_03157987


Basic Information

Item Value
gene id CI01000018_03144746_03157987
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3144654 ~ 3158243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_03144746_03157987.mRNA
TTTTAAAAACCATGTTTCAAACCTCCAGCCAGCGTCAGTTCGTTTAAATTTATCCTGTTGCAACTTTGAAGACTCTTAAGAATACCATCAAAATGACTGAGGAGAGCAAAGCCGAACACAGAGCCGAAAGTGGGAAAGATTTAGAGAAACAGCTTCGTTTGCGAGTTTGTGTTTTGAATGAACTTCTGAAGACCGAACGGGATTATGTTGGGACGCTGGAGTTTCTCTCGGATTGTCCTTTGTGGCTCCACTGTGATCGGCGACAGACTGCTGGTGCCATCTTCCCTGTCTCTTGTATTCTGCTAACTAGTCCCGGCCTCCAACGGAGTGACTGGCATGCTGAAGGGGTTAGTGAGGGCCACTGTTCATTCATACACAAAGATGGCATTGATCCCAGAACACTTGGAGGGGGCACTTTTGGCCGGCCCTTTTCATTGACATTCAAGCTGTCTTTAGGGATTTCCAAAAGGAAAGACAAAGTTGTTTTCTCTCTTTCCCTCCACTGACGGCGTCCAATTGCAACCAAGTCTGAGGTTCTAAGATCCCCAACAGCATCAGATCCAGTAAAAATTGGCTTTATTGAACAACCCAAGACAGAATTCAAATCAATAGCACTGTCGTGTGTGCCACACATGCTGACTGAGCTTGATACGTGCAGCTTAAAATTCAGCTTGTCACCATGGGCATTCAGACGCCATTCTGTAATGGGATTTTGACCCCTTGATACAAAACAATAAGCTTTGATATGCACATGCAGTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_03144746_03157987.mRNA True 762 mRNA 0.45 2 3144654 3158243

Neighbor

gene id symbol gene type direction distance location
CI01000018_03009909_03030542 CSPP1 coding upstream 114045 3009909 ~ 3030609 (+)
CI01000018_02868921_02905963 NA coding upstream 238664 2868921 ~ 2905990 (+)
CI01000018_02864151_02865976 NA coding upstream 278676 2864151 ~ 2865978 (+)
CI01000018_02370124_02372215 NA coding upstream 771749 2370071 ~ 2372905 (+)
CI01000018_02344327_02354633 EZH2 coding upstream 789241 2344327 ~ 2355413 (+)
CI01000018_03168822_03281088 PREX2 coding downstream 10579 3168822 ~ 3281088 (+)
CI01000018_03315696_03388918 NA coding downstream 157453 3315696 ~ 3388918 (+)
CI01000018_03468481_03471726 NA coding downstream 310030 3468273 ~ 3471880 (+)
CI01000018_03482157_03507502 SULF1 coding downstream 323190 3481433 ~ 3508466 (+)
CI01000018_03513125_03558562 SLCO5A1 coding downstream 353119 3511362 ~ 3558720 (+)
G103688 NA non-coding upstream 10659 3114952 ~ 3133995 (+)
G103645 NA non-coding upstream 86135 3055389 ~ 3058519 (+)
G103646 NA non-coding upstream 102820 3041363 ~ 3041834 (+)
G103597 NA non-coding upstream 235841 2907768 ~ 2908813 (+)
G103608 NA non-coding upstream 317468 2826945 ~ 2827186 (+)
G104191 NA non-coding downstream 266038 3424281 ~ 3424688 (+)
G104199 NA non-coding downstream 279156 3437399 ~ 3437635 (+)
G104206 NA non-coding downstream 288602 3446845 ~ 3447072 (+)
G104219 NA non-coding downstream 409367 3567610 ~ 3567882 (+)
G104221 NA non-coding downstream 426101 3584344 ~ 3584573 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1159343 1924489 ~ 1985311 (+)
G102895 NA other upstream 1558992 1582913 ~ 1585662 (+)
G104258 NA other downstream 532846 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 1211943 4368179 ~ 4375866 (+)
G104670 NA other downstream 1597558 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2058437 5216452 ~ 5222616 (+)
G106429 NA other downstream 3723368 6881611 ~ 6886325 (+)

Expression


Co-expression Network