G104191


Basic Information

Item Value
gene id G104191
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3424281 ~ 3424688 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118506
CATATGAAACCAAAGATCATAGTTGTATCTGAGAAGGTAGACCTTTTGAAAATCATTATATGTGACCCGTGCTGGCAAAATGAGTCGCAATGAGCAAATTTTCAATAATTTGTTCTCACATTCTCTATTTAAAAAAAAAACCTTCTAAATGATGTATGATTTGTTGGAATCTGACAAAAAATGACTGAGCTACACCTGTTTGAAGTCGATAAAGTCAGCAAAGTCCGTTTTGAGAAATCGAGTTAAAGTTTTCTGAAGGTTCCAAAACAAAATCACCTAGCAACCATACCTTAAAATTCCTGGTAGTACCACCAAATTTGGCACAAACCAAGTCAGAACCCATATCTCTAGGAAAAATATCTATATTCAACTTTTGTTTTTTGTTTTTTTTTTTTCCCATGATTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118506 True 408 lncRNA 0.33 1 3424281 3424688

Neighbor

gene id symbol gene type direction distance location
CI01000018_03315696_03388918 NA coding upstream 35363 3315696 ~ 3388918 (+)
CI01000018_03168822_03281088 PREX2 coding upstream 143193 3168822 ~ 3281088 (+)
CI01000018_03144746_03157987 NA coding upstream 266038 3144654 ~ 3158243 (+)
CI01000018_03009909_03030542 CSPP1 coding upstream 393672 3009909 ~ 3030609 (+)
CI01000018_02868921_02905963 NA coding upstream 518291 2868921 ~ 2905990 (+)
CI01000018_03468481_03471726 NA coding downstream 43585 3468273 ~ 3471880 (+)
CI01000018_03482157_03507502 SULF1 coding downstream 56745 3481433 ~ 3508466 (+)
CI01000018_03513125_03558562 SLCO5A1 coding downstream 86674 3511362 ~ 3558720 (+)
CI01000018_03630815_03635622 NA coding downstream 206089 3630777 ~ 3635787 (+)
CI01000018_03714508_03725674 NA coding downstream 289820 3714508 ~ 3725930 (+)
G103688 NA non-coding upstream 290286 3114952 ~ 3133995 (+)
G103645 NA non-coding upstream 365762 3055389 ~ 3058519 (+)
G103646 NA non-coding upstream 382447 3041363 ~ 3041834 (+)
G103597 NA non-coding upstream 515468 2907768 ~ 2908813 (+)
G103608 NA non-coding upstream 597095 2826945 ~ 2827186 (+)
G104199 NA non-coding downstream 12711 3437399 ~ 3437635 (+)
G104206 NA non-coding downstream 22157 3446845 ~ 3447072 (+)
G104219 NA non-coding downstream 142922 3567610 ~ 3567882 (+)
G104221 NA non-coding downstream 159656 3584344 ~ 3584573 (+)
G104229 NA non-coding downstream 190616 3615304 ~ 3615594 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1438970 1924489 ~ 1985311 (+)
G102895 NA other upstream 1838619 1582913 ~ 1585662 (+)
G104258 NA other downstream 266401 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 945498 4368179 ~ 4375866 (+)
G104670 NA other downstream 1331113 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 1791992 5216452 ~ 5222616 (+)
G106429 NA other downstream 3456923 6881611 ~ 6886325 (+)

Expression


Co-expression Network