G103645


Basic Information

Item Value
gene id G103645
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3055389 ~ 3058519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117906
GCAAAAAGGCATTTGGCCAATTATAGCTTTTTTTATGCATATAATTCAAAAGAGTCTATTTGATTCTATGATTGATCGATATTGTCACCATGTTTGTTGGTGCGCTAAATACTCACTTTGCTTATTTGACTTGAGAGTTAATTCCTTTGTCTCCTTCATAGATATTTTTTTCCCTGCGATTTCATCATAAATGGCTGAGAGATACTCCTCCGGTAAATCTTTACTGTCATTGATACCTCGGTTCATCTTGATGTATTGCTCTTTTGTCATTTTATTCTTCACCTGCGGACTGTGTAGATCTGTAGTCAACATGATGATTGAATACGCGAGGACGTATGCAGTGTCTGCGCTGGCGAACAGTGTTTGCCCTTGGTTGCATTCTAAATATCTAGCAGCAAATTTCTCCATCAGTCGATCGATTTTCTGGGCCTCTCCGGGTAGACGGAAACCCTCAAGGAACATGCGCAGCGCTGGCACGAAGTCTTTGCCCTGGAAGTCCATTTGGTCGACGTAGGCATACATAACCTCTTTATTGATGCGATCGTTGTCTCCAAGAAACTCTCCTACCTGGATCTAGTCAAGTCTCTCCTCTTGATGTAAAAATTGGGCGATATCTTCAGGCGTGGTTCCCAGCATGCCTTGTTCCTGCAGGTACTGAATGCCCCTCTTTGGTTTTTTGTTGAACAGGTCAATGCCTTGCTCTATGATCTCCTTCTGTTGTTTGAGGACCTCAAACTGCTCAGGGTTGTCCGTCCCAGACATCTGCGTGCTGTAGCTCCCGATGCCTGACGAGGCGGTGGAGTCCAATGAGTTTATGCTGCCGTAGCGGTTAATCGTTTCTGGATGCTTCGACTCATTGGTTTCCTGCTCTAAAGGCTTTTCTTGGCCTGATCGAAAGAGAAGAGAAATGAAATTCAGATGCAATTTTTAAGAGAACACAGAAGAAATGATGAGCCCGGTTTGTGAAACACCACGAGCCCCTGCAGCCAAGGGACTAGAGACAGCATGATTCATTGGAGTCCTGGTCGGCTGAAATGTGTGTTGGTACATCGAGTCTTTTCTCTGGCTCAGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117906 True 1075 lncRNA 0.45 5 3055389 3058519

Neighbor

gene id symbol gene type direction distance location
CI01000018_03009909_03030542 CSPP1 coding upstream 24780 3009909 ~ 3030609 (+)
CI01000018_02868921_02905963 NA coding upstream 149399 2868921 ~ 2905990 (+)
CI01000018_02864151_02865976 NA coding upstream 189411 2864151 ~ 2865978 (+)
CI01000018_02370124_02372215 NA coding upstream 682484 2370071 ~ 2372905 (+)
CI01000018_02344327_02354633 EZH2 coding upstream 699976 2344327 ~ 2355413 (+)
CI01000018_03144746_03157987 NA coding downstream 86135 3144654 ~ 3158243 (+)
CI01000018_03168822_03281088 PREX2 coding downstream 110303 3168822 ~ 3281088 (+)
CI01000018_03315696_03388918 NA coding downstream 257177 3315696 ~ 3388918 (+)
CI01000018_03468481_03471726 NA coding downstream 409754 3468273 ~ 3471880 (+)
CI01000018_03482157_03507502 SULF1 coding downstream 422914 3481433 ~ 3508466 (+)
G103646 NA non-coding upstream 13555 3041363 ~ 3041834 (+)
G103597 NA non-coding upstream 146576 2907768 ~ 2908813 (+)
G103608 NA non-coding upstream 228203 2826945 ~ 2827186 (+)
G103606 NA non-coding upstream 236262 2818818 ~ 2819127 (+)
G103604 NA non-coding upstream 252053 2803046 ~ 2803336 (+)
G103688 NA non-coding downstream 56433 3114952 ~ 3133995 (+)
G104191 NA non-coding downstream 365762 3424281 ~ 3424688 (+)
G104199 NA non-coding downstream 378880 3437399 ~ 3437635 (+)
G104206 NA non-coding downstream 388326 3446845 ~ 3447072 (+)
G104219 NA non-coding downstream 509091 3567610 ~ 3567882 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1070078 1924489 ~ 1985311 (+)
G102895 NA other upstream 1469727 1582913 ~ 1585662 (+)
G104258 NA other downstream 632570 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 1311667 4368179 ~ 4375866 (+)
G104670 NA other downstream 1697282 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2158161 5216452 ~ 5222616 (+)
G106429 NA other downstream 3823092 6881611 ~ 6886325 (+)

Expression


Co-expression Network