G104199


Basic Information

Item Value
gene id G104199
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3437399 ~ 3437635 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118514
CAGACACAGACACAGACACACACACACACACGGTCATCCACGTGATGTGAAAGAAAACATGATTCATCAGACGAGGCCACCTTCTTCCATTGCTCCGTGGTCCAGTTCTGATGTTCACTGTTGGCGCTTTCGGCAGTGGACAGGGGTCAGCATGGGCACCCTGACTGGTCTGCAGCTATGCAGCCCCATACACAACAAACTGTGATGCACTGTGTGTTCTGACACCTTTCTATCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118514 True 237 lncRNA 0.51 1 3437399 3437635

Neighbor

gene id symbol gene type direction distance location
CI01000018_03315696_03388918 NA coding upstream 48481 3315696 ~ 3388918 (+)
CI01000018_03168822_03281088 PREX2 coding upstream 156311 3168822 ~ 3281088 (+)
CI01000018_03144746_03157987 NA coding upstream 279156 3144654 ~ 3158243 (+)
CI01000018_03009909_03030542 CSPP1 coding upstream 406790 3009909 ~ 3030609 (+)
CI01000018_02868921_02905963 NA coding upstream 531409 2868921 ~ 2905990 (+)
CI01000018_03468481_03471726 NA coding downstream 30638 3468273 ~ 3471880 (+)
CI01000018_03482157_03507502 SULF1 coding downstream 43798 3481433 ~ 3508466 (+)
CI01000018_03513125_03558562 SLCO5A1 coding downstream 73727 3511362 ~ 3558720 (+)
CI01000018_03630815_03635622 NA coding downstream 193142 3630777 ~ 3635787 (+)
CI01000018_03714508_03725674 NA coding downstream 276873 3714508 ~ 3725930 (+)
G104191 NA non-coding upstream 12711 3424281 ~ 3424688 (+)
G103688 NA non-coding upstream 303404 3114952 ~ 3133995 (+)
G103645 NA non-coding upstream 378880 3055389 ~ 3058519 (+)
G103646 NA non-coding upstream 395565 3041363 ~ 3041834 (+)
G103597 NA non-coding upstream 528586 2907768 ~ 2908813 (+)
G104206 NA non-coding downstream 9210 3446845 ~ 3447072 (+)
G104219 NA non-coding downstream 129975 3567610 ~ 3567882 (+)
G104221 NA non-coding downstream 146709 3584344 ~ 3584573 (+)
G104229 NA non-coding downstream 177669 3615304 ~ 3615594 (+)
G104249 NA non-coding downstream 235226 3672861 ~ 3673062 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1452088 1924489 ~ 1985311 (+)
G102895 NA other upstream 1851737 1582913 ~ 1585662 (+)
G104258 NA other downstream 253454 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 932551 4368179 ~ 4375866 (+)
G104670 NA other downstream 1318166 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 1779045 5216452 ~ 5222616 (+)
G106429 NA other downstream 3443976 6881611 ~ 6886325 (+)

Expression


Co-expression Network