G104249


Basic Information

Item Value
gene id G104249
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3672861 ~ 3673062 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118564
GGAAACACGATGCATTAAGAGTCGGGGGGTGAAAACTTTTGAACAGGATGAAGAGGTCCAAATTTTTCTTATTTCGCTTGAATATCATTTTTTTTCATTTAGTACTGCCCTTCAGAAGCAACAGAAAATACTTGCATGTTTCCTGGAAGACAAATTAAATACAATTTACCTTGATCTTCAAATTCCAAATGTTTTCACCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118564 True 202 lncRNA 0.36 1 3672861 3673062

Neighbor

gene id symbol gene type direction distance location
CI01000018_03630815_03635622 NA coding upstream 37074 3630777 ~ 3635787 (+)
CI01000018_03513125_03558562 SLCO5A1 coding upstream 114141 3511362 ~ 3558720 (+)
CI01000018_03482157_03507502 SULF1 coding upstream 164395 3481433 ~ 3508466 (+)
CI01000018_03468481_03471726 NA coding upstream 200981 3468273 ~ 3471880 (+)
CI01000018_03315696_03388918 NA coding upstream 283943 3315696 ~ 3388918 (+)
CI01000018_03714508_03725674 NA coding downstream 41446 3714508 ~ 3725930 (+)
CI01000018_03727066_03727226 NA coding downstream 54004 3727066 ~ 3727308 (+)
CI01000018_03865690_03869961 NA coding downstream 192249 3865311 ~ 3870063 (+)
CI01000018_03883336_03887135 ACAA1 coding downstream 209700 3882762 ~ 3887214 (+)
CI01000018_03923541_03939515 NA coding downstream 250479 3923541 ~ 3939670 (+)
G104229 NA non-coding upstream 57267 3615304 ~ 3615594 (+)
G104221 NA non-coding upstream 88288 3584344 ~ 3584573 (+)
G104219 NA non-coding upstream 104979 3567610 ~ 3567882 (+)
G104206 NA non-coding upstream 225789 3446845 ~ 3447072 (+)
G104199 NA non-coding upstream 235226 3437399 ~ 3437635 (+)
G104255 NA non-coding downstream 14938 3688000 ~ 3688300 (+)
G104257 NA non-coding downstream 17101 3690163 ~ 3690446 (+)
G104336 NA non-coding downstream 138776 3811838 ~ 3812537 (+)
G104337 NA non-coding downstream 142450 3815512 ~ 3817032 (+)
G104338 NA non-coding downstream 145326 3818388 ~ 3818677 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1687550 1924489 ~ 1985311 (+)
G102895 NA other upstream 2087199 1582913 ~ 1585662 (+)
G104258 NA other downstream 18027 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 697124 4368179 ~ 4375866 (+)
G104670 NA other downstream 1082739 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 1543618 5216452 ~ 5222616 (+)
G106429 NA other downstream 3208549 6881611 ~ 6886325 (+)

Expression


Co-expression Network