G104670


Basic Information

Item Value
gene id G104670
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4755801 ~ 4759768 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118997
AATGGAGAGTCAGTGCAATGGCAGCCGAGAGAGGGAGGAGGGGGGAGGCTCTCAGCGCCCACTTACTCCATGCCCCGCAATCCGCTCTCTTGCCCACCGGGCTCTTGATGTCAGACTTGCTGCTAGATGGGCTTGATATCTGGATGGGCTTTGTCACAAAGTCCTGTGAGGTGCACCGGCGGGGGCGCAGGCTCCTAAACCAGAGACGCTGTAAACTTCGCAGCTCCTGTTTTTGGGAAAAGTCCTCATGGCCCGCTATCTTATGGCTCCGATGCAGCGATACAGAACAATACCTCGGGCAGAGAAATCAGCCCGGAGACGTAGTGAGATCCCGGAGAAACCCGACCTGAGCGGGTCTGGCGCTGCGAGCAATCACTCTCCGTGTCTCTCCGTGAACAGGTGCTGCGCGGCACCCAGCATGCACCGCGGCACAAAGGGAGCACTATGAGCAGGAAGGTTGGGTCTGCCACAGCCGGAACCCCAACTCACAATGCCCGTCAGAAACCAGCGGCTGCCTGTGCGTGCTTGACAGGACAGGGGGCCACCCGAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118997 True 552 TUCP 0.60 3 4755801 4759768

Neighbor

gene id symbol gene type direction distance location
CI01000018_04677346_04694247 PAN3 coding upstream 61174 4677159 ~ 4694627 (+)
CI01000018_04654210_04656581 PDX1 coding upstream 98706 4653729 ~ 4657095 (+)
CI01000018_04649969_04650862 NA coding upstream 104887 4648628 ~ 4650914 (+)
CI01000018_04623186_04625739 NA coding upstream 129952 4622752 ~ 4625849 (+)
CI01000018_04613416_04615346 RL21, MGC80700, RPL21P28, RPL21, GM10155, GM9104, RPL21.L, GM10163, GM10045, GM10095, RPL21-PS8 coding upstream 140441 4613223 ~ 4615360 (+)
CI01000018_04823817_04825235 SAT1B, SAT1, SAT1A.1, SAT1A.2 coding downstream 64049 4823817 ~ 4825299 (+)
CI01000018_04834805_04838328 ROPN1L coding downstream 74723 4834491 ~ 4838400 (+)
CI01000018_04843213_04852105 ANKRD33BA coding downstream 82113 4841881 ~ 4853351 (+)
CI01000018_05217404_05218896 NA coding downstream 457636 5216452 ~ 5222616 (+)
CI01000018_05252991_05253583 PKIA coding downstream 493223 5252964 ~ 5254493 (+)
G104665 NA non-coding upstream 5470 4749726 ~ 4750331 (+)
G104664 NA non-coding upstream 6161 4748935 ~ 4749640 (+)
G104662 NA non-coding upstream 12386 4742481 ~ 4743415 (+)
G104660 NA non-coding upstream 14653 4740844 ~ 4741148 (+)
G104659 NA non-coding upstream 15055 4739277 ~ 4740746 (+)
G104673 NA non-coding downstream 832 4760600 ~ 4760832 (+)
G104625 NA non-coding downstream 24809 4784577 ~ 4785010 (+)
G104628 NA non-coding downstream 28378 4788146 ~ 4789520 (+)
G104677 NA non-coding downstream 37481 4797249 ~ 4800870 (+)
G104742 NA non-coding downstream 266203 5025971 ~ 5026354 (+)
CI01000018_04368179_04375192 NA other upstream 382389 4368179 ~ 4375866 (+)
G104258 NA other upstream 1064282 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2770490 1924489 ~ 1985311 (+)
G102895 NA other upstream 3170139 1582913 ~ 1585662 (+)
G106429 NA other downstream 2121843 6881611 ~ 6886325 (+)

Expression


Co-expression Network