Gene
RNA
| Item | Value |
|---|---|
| gene id | G104742 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 5025971 ~ 5026354 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119076 | True | 348 | lncRNA | 0.30 | 2 | 5025971 | 5026354 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_04843213_04852105 | ANKRD33BA | coding | upstream | 172620 | 4841881 ~ 4853351 (+) |
| CI01000018_04834805_04838328 | ROPN1L | coding | upstream | 187571 | 4834491 ~ 4838400 (+) |
| CI01000018_04823817_04825235 | SAT1B, SAT1, SAT1A.1, SAT1A.2 | coding | upstream | 200672 | 4823817 ~ 4825299 (+) |
| CI01000018_04677346_04694247 | PAN3 | coding | upstream | 331344 | 4677159 ~ 4694627 (+) |
| CI01000018_04654210_04656581 | PDX1 | coding | upstream | 368876 | 4653729 ~ 4657095 (+) |
| CI01000018_05217404_05218896 | NA | coding | downstream | 191050 | 5216452 ~ 5222616 (+) |
| CI01000018_05252991_05253583 | PKIA | coding | downstream | 226637 | 5252964 ~ 5254493 (+) |
| CI01000018_05500930_05501895 | PEX2 | coding | downstream | 474358 | 5500712 ~ 5502185 (+) |
| CI01000018_05840337_05846290 | CSN5, COPS5.S, COPS5 | coding | downstream | 813983 | 5840337 ~ 5846434 (+) |
| CI01000018_05850844_05856405 | PPP1R42 | coding | downstream | 824490 | 5850844 ~ 5856646 (+) |
| G104677 | NA | non-coding | upstream | 225101 | 4797249 ~ 4800870 (+) |
| G104628 | NA | non-coding | upstream | 236451 | 4788146 ~ 4789520 (+) |
| G104625 | NA | non-coding | upstream | 240961 | 4784577 ~ 4785010 (+) |
| G104673 | NA | non-coding | upstream | 265139 | 4760600 ~ 4760832 (+) |
| G104665 | NA | non-coding | upstream | 275640 | 4749726 ~ 4750331 (+) |
| G104757 | NA | non-coding | downstream | 172968 | 5199322 ~ 5208279 (+) |
| G104908 | NA | non-coding | downstream | 443997 | 5470351 ~ 5488100 (+) |
| G105549 | NA | non-coding | downstream | 482056 | 5508410 ~ 5508717 (+) |
| G104670 | NA | other | upstream | 266203 | 4755801 ~ 4759768 (+) |
| CI01000018_04368179_04375192 | NA | other | upstream | 652559 | 4368179 ~ 4375866 (+) |
| G104258 | NA | other | upstream | 1334452 | 3691089 ~ 3691519 (+) |
| CI01000018_01924489_01985310 | SEMA5A | other | upstream | 3040660 | 1924489 ~ 1985311 (+) |
| G102895 | NA | other | upstream | 3440309 | 1582913 ~ 1585662 (+) |
| G106429 | NA | other | downstream | 1855257 | 6881611 ~ 6886325 (+) |
