G104660


Basic Information

Item Value
gene id G104660
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4740844 ~ 4741148 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118987
TCAGTCGAAAAGAAATGAGGGTTTTTGATGAAAACATTCCAGGATTATTCTCCTTATAGTGGACTTCAATTGGACCCAAACGGTTGAAGGTCAAAATTACAGTTTCAGTGCAGCTTCAAAGGGCTTTAAATGATACCAGACAAGGAATAAGGGTCTATCTAGCGAAACAATCGGTCATTTTCTAAAAAAAAATAAAAATGTATATGCTTTCTAAACACAAATGATCGCCTCGCAAGTGCTTCTGCCAGACCGCCTTCCGTATTCTTCAAAAATCTTTCGACTGAAGAAAGAAGGACATGGACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118987 True 305 lncRNA 0.38 1 4740844 4741148

Neighbor

gene id symbol gene type direction distance location
CI01000018_04677346_04694247 PAN3 coding upstream 46217 4677159 ~ 4694627 (+)
CI01000018_04654210_04656581 PDX1 coding upstream 83749 4653729 ~ 4657095 (+)
CI01000018_04649969_04650862 NA coding upstream 89930 4648628 ~ 4650914 (+)
CI01000018_04623186_04625739 NA coding upstream 114995 4622752 ~ 4625849 (+)
CI01000018_04613416_04615346 RL21, MGC80700, RPL21P28, RPL21, GM10155, GM9104, RPL21.L, GM10163, GM10045, GM10095, RPL21-PS8 coding upstream 125484 4613223 ~ 4615360 (+)
CI01000018_04823817_04825235 SAT1B, SAT1, SAT1A.1, SAT1A.2 coding downstream 82669 4823817 ~ 4825299 (+)
CI01000018_04834805_04838328 ROPN1L coding downstream 93343 4834491 ~ 4838400 (+)
CI01000018_04843213_04852105 ANKRD33BA coding downstream 100733 4841881 ~ 4853351 (+)
CI01000018_05217404_05218896 NA coding downstream 476256 5216452 ~ 5222616 (+)
CI01000018_05252991_05253583 PKIA coding downstream 511843 5252964 ~ 5254493 (+)
G104659 NA non-coding upstream 98 4739277 ~ 4740746 (+)
G104605 NA non-coding upstream 124211 4615852 ~ 4616633 (+)
G104635 NA non-coding upstream 140742 4599015 ~ 4600102 (+)
CI01000018_04598617_04598799 NA non-coding upstream 142097 4598285 ~ 4598841 (+)
G104548 NA non-coding upstream 186763 4539170 ~ 4554081 (+)
G104662 NA non-coding downstream 1333 4742481 ~ 4743415 (+)
G104664 NA non-coding downstream 7787 4748935 ~ 4749640 (+)
G104665 NA non-coding downstream 8578 4749726 ~ 4750331 (+)
G104673 NA non-coding downstream 19452 4760600 ~ 4760832 (+)
G104625 NA non-coding downstream 43429 4784577 ~ 4785010 (+)
CI01000018_04368179_04375192 NA other upstream 367432 4368179 ~ 4375866 (+)
G104258 NA other upstream 1049325 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2755533 1924489 ~ 1985311 (+)
G102895 NA other upstream 3155182 1582913 ~ 1585662 (+)
G104670 NA other downstream 14653 4755801 ~ 4759768 (+)
G106429 NA other downstream 2140463 6881611 ~ 6886325 (+)

Expression


Co-expression Network