G104635


Basic Information

Item Value
gene id G104635
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4599015 ~ 4600102 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118961
TATAACAGTGTAAATTTGCTGTCCCCTCAAAATAACTCAACACACAGCCATTAATGTCTAAACCGCTGGCCACAAAAGTGAGTACACCCCTAAGTGAAAATGTCCAAATTGGGCCCAATTAGCCATTTTCTCTCCCCGGTGTCATGTGACTCATTAGTGTTACAAGGTCTCAGGTGTGAATGGGGAGCAGGTGTGTTAAATTTGGTGTTATCGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118961 True 216 lncRNA 0.44 2 4599015 4600102

Neighbor

gene id symbol gene type direction distance location
CI01000018_04598617_04598799 NA coding upstream 174 4598285 ~ 4598841 (+)
CI01000018_04579960_04588477 WASF3B, WASF3 coding upstream 10432 4579893 ~ 4588583 (+)
CI01000018_04563971_04573228 CDK8, CDK8.S coding upstream 25556 4563926 ~ 4573459 (+)
CI01000018_04474455_04481868 SHISA2 coding upstream 117101 4474455 ~ 4481914 (+)
CI01000018_04449934_04462663 NA coding upstream 136184 4449384 ~ 4462831 (+)
CI01000018_04613416_04615346 RL21, MGC80700, RPL21P28, RPL21, GM10155, GM9104, RPL21.L, GM10163, GM10045, GM10095, RPL21-PS8 coding downstream 13121 4613223 ~ 4615360 (+)
CI01000018_04623186_04625739 NA coding downstream 22650 4622752 ~ 4625849 (+)
CI01000018_04649969_04650862 NA coding downstream 48526 4648628 ~ 4650914 (+)
CI01000018_04654210_04656581 PDX1 coding downstream 53627 4653729 ~ 4657095 (+)
CI01000018_04677346_04694247 PAN3 coding downstream 77057 4677159 ~ 4694627 (+)
G104548 NA non-coding upstream 44934 4539170 ~ 4554081 (+)
G104532 NA non-coding upstream 114961 4483219 ~ 4484054 (+)
G104594 NA non-coding upstream 144696 4454104 ~ 4454319 (+)
G104522 NA non-coding upstream 296053 4302761 ~ 4302962 (+)
G104605 NA non-coding downstream 15750 4615852 ~ 4616633 (+)
G104659 NA non-coding downstream 139175 4739277 ~ 4740746 (+)
G104660 NA non-coding downstream 140742 4740844 ~ 4741148 (+)
G104662 NA non-coding downstream 142379 4742481 ~ 4743415 (+)
G104664 NA non-coding downstream 148833 4748935 ~ 4749640 (+)
CI01000018_04368179_04375192 NA other upstream 225603 4368179 ~ 4375866 (+)
G104258 NA other upstream 907496 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2613704 1924489 ~ 1985311 (+)
G102895 NA other upstream 3013353 1582913 ~ 1585662 (+)
G104670 NA other downstream 155699 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 616578 5216452 ~ 5222616 (+)
G106429 NA other downstream 2281509 6881611 ~ 6886325 (+)

Expression


Co-expression Network