G104594


Basic Information

Item Value
gene id G104594
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4454104 ~ 4454319 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118919
GGAAGAGATAAGATTGAAATAAAATATCAAATAAAATCTCTCTATTAATACTCACTAAGTATACCATTATAGCCAAGTCTGGAAATGTTTACATTTTTAATGTTTAGCTAACTTAGTATTAGCACACATTAGCATTACCATAAAATATGCTTATATTGACAAATCAGGCAAATTTCAAAGACATCTTTAGCTCCAAGCTCATATGAGTGACCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118919 True 216 lncRNA 0.29 1 4454104 4454319

Neighbor

gene id symbol gene type direction distance location
CI01000018_04384928_04393242 USF3 coding upstream 60746 4384928 ~ 4393358 (+)
CI01000018_04378035_04382378 NAA50 coding upstream 70608 4378035 ~ 4383496 (+)
CI01000018_04368179_04375192 NA coding upstream 78238 4368179 ~ 4375866 (+)
CI01000018_04322915_04335655 NA coding upstream 118264 4322915 ~ 4335840 (+)
CI01000018_04265169_04284528 DRD3 coding upstream 169484 4265169 ~ 4284620 (+)
CI01000018_04474455_04481868 SHISA2 coding downstream 20136 4474455 ~ 4481914 (+)
CI01000018_04563971_04573228 CDK8, CDK8.S coding downstream 109607 4563926 ~ 4573459 (+)
CI01000018_04579960_04588477 WASF3B, WASF3 coding downstream 125574 4579893 ~ 4588583 (+)
CI01000018_04598617_04598799 NA coding downstream 143966 4598285 ~ 4598841 (+)
CI01000018_04613416_04615346 RL21, MGC80700, RPL21P28, RPL21, GM10155, GM9104, RPL21.L, GM10163, GM10045, GM10095, RPL21-PS8 coding downstream 158904 4613223 ~ 4615360 (+)
G104522 NA non-coding upstream 151142 4302761 ~ 4302962 (+)
G104521 NA non-coding upstream 151670 4302199 ~ 4302434 (+)
G104519 NA non-coding upstream 160229 4293637 ~ 4293875 (+)
G104458 NA non-coding upstream 321069 4123943 ~ 4133035 (+)
G104452 NA non-coding upstream 343929 4109923 ~ 4110175 (+)
G104532 NA non-coding downstream 28900 4483219 ~ 4484054 (+)
G104548 NA non-coding downstream 84851 4539170 ~ 4554081 (+)
G104635 NA non-coding downstream 144696 4599015 ~ 4600102 (+)
G104605 NA non-coding downstream 161533 4615852 ~ 4616633 (+)
G104258 NA other upstream 762585 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2468793 1924489 ~ 1985311 (+)
G102895 NA other upstream 2868442 1582913 ~ 1585662 (+)
G104670 NA other downstream 301482 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 762361 5216452 ~ 5222616 (+)
G106429 NA other downstream 2427292 6881611 ~ 6886325 (+)

Expression


Co-expression Network