CI01000018_04322915_04335655


Basic Information

Item Value
gene id CI01000018_04322915_04335655
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4322915 ~ 4335840 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04322915_04335655.mRNA
GTGCAGCTGAATGAGAATGACATAAAACAGTGGGTGAAGAGGGTGGAGATGGCTTCAGAGTTCGCTGTAGCTGAGGTGTTTTCCATGAAGAAACCACATGGTGGTAAAAGTATGGCACTGCAGAGCGTTGAACAGCTACAGGATCATGATGATGCGTACAGTGAAGCTCAGTCTATTCTAAGTGAATGGATGAACCAGAAGTTACGTCTGGAGCTTGAAATGGATGATGACGAGGAGGAAGAGGAGATGAGTTCCAGTAAAAAGGATGACTCAGAATCCAAACAACTTGTTAAGGCCAAACAACCTAGTTATAATAACTTTGATGACATGTACTTTCACCTAGAGCAGGAAGAGGACAACTCTGTAGTGCACAATTTCCTCCAGGACCTGATGGAAACCGAGGTGTTGGACTTTGGAATACTGGAGAACCTCAAAGTAGACTCTGACCTGAGTAAGAAGAAATGGAGGGACCCTAGCATCACTATGGAGGTGCGTCACAAGCAGGTAAAGGAGAACCGCATGCGCAGAGATGCAGAGCTTGACAAACTGCGTAAAGAGAAAGAGACGCTAAGGGAGGCACGAGAGGAAGCGTGGCAACTGGAACAGGAGAAGCAGAGAAAGAAGAGACAGCAGGCACGCAGACAGGAAGAACTGATACAGCAGGAGATGATTCGCTTGCGTAGAGAGATGGAGGAGAAGAGGAGTGTGGAGCAGCTTGCACGAAACATGGAGAGGGAAAAGCTTCAGAAACAAAGGGCCACTAAGAGCTCCGTCATTCCAAAATGTTATAATTCCACACAGAAGAAACAGAACAAAGACCTTCAACTTAAGCTGAAGAACCTGGAAGCCAAAGTTCACCTTCTCAATTTGCAGTGCATTCACAGGCATTTTACAGCATGGTACTCTGTGATAATGGAGAGGAGGGTACGCATGGGCAAGGCAGCGGCGCTGTGTGATTGGAGGAGGCAGCTTAGGGCATGGCGGGCATGGCGGGCTCTTGTTTGGGCCAGAAGAGAGGAGAAAGAGGCTGAAAAGACTGAAGAAGAGCTCAGACAGGAGCACAGGCAGGAGAACTCAATTTATAAAAGCCTGCGCTGTCAGCAGGCGGTGGAGAGTGACCGCAGGAGGCTTTTGAGGCGCTGCCTCAGTGAGTGGCGTGTGTGGTGTCAGGTGGAACGTCATCGCAAGGAGCTTCTCCAACAACAAGAAGAAACCCGACGTAAAATGGCTGCCTTGATCAGTGCGGCTGCTTCTGGGAAACTAGGGGCAGAAAAATCTCCACAAATTACCAACCCACCTGAAACACTCAGTCTTACAGAACACATCAGCCATCAGGAGGTGCCAGCGGCTCCAGAAAGCAGTTCACACACTGTACAAGCCAATAAAAGCACAGGCCGTTCAGAGGCCCCGCCAACCCAAGCCTGGCAGGTAACGCGTCGTCATGCCGCTCTCTCATCGGCTGAGCTACGACGGGCCCGTCAGGGGCAACAGCAGCAGACCACCCGAAGTGGAAGTGCAGAGCATGGCGGTGGACAGTTCAAACATGGCCATGTGGCCCTGCAGCAAACTGTAGCAGAGCAGAGGCGCCTTCTGAAAGAGCAACAGGAGCAGATTCAGCAACTGCAAGAGAGACAGAACATTCTAGAACTGAGACACGAGGCAGAGAAATCGGCATTGTTAGCAACAGGTCCTCCTGGAGCTATAAGCACATGCTGTCCACCTAAACCCAACACAAATACTGCAAGAGGAAGTGCAGAAACACTAAGAACAAAGAGTGCCTCAGGGGATAACGCCAGCAGCCACACCGACCAAAAATCATCTCTGCATCGTTCAGCACTTCCCCATCCTACAGTACAAGCCATGGAGGAACGAGCACGCCAGCGCGCCGAGCGCCGGAGAGAGATTGAGGAGCAGAGGAGACAGAAGCAGGAGGAGAAACTGAGGGAGCTTGAGAAGCAGAAGAGAGCAGAACGGGAACAGGAACTGTCAAAGCGGGCGGCCCAGCACTACCTCAGAACCCTGTTACTGCACCGAGGCCTGGCACCATGGAAATGCCTGCTGGAGCAAAGCCATGTCAACACACAGAGAGCGGTGGATCATTGCACTCTGGCTCTGCAGAGAAGCTGCTTCTGCTCTTGGCGGCAGTCTGTGGATGAGGCCCACGCAGAGAGAGAGGCCAGTGCCAACCAGCTGTATCACCGGATCCTGCTTCAGAGGGCTGTGTGTAGCTGGAAAAGGTTAAAAGATCTGCGCTGTATACTGGAAGCACGAGCCGAGCGGTTCCACAAGATAAACACCCAGAGGAAGGTGTTCACGGCACTGCTAGATCACGCTACAGAGGAGCGAATAACAGCCTGGGACAATGAGCAGCGGGCAGAGGAGCACCACAGCAGGAGAGCTGTCAAGAAGTGTTTTGCTGGCTGGAGGCGTCTTCCTGTTGTCTTGCGAGAGGAGAAAGAAAGAGAGGCACGTAGAGATGAACTCAGACGGAAAGTGGCGGAGATTTTGCCTGACTTCCGCGCCTCCCCTATAGACTCCCTGTGGCGCTCCGTAAATCCTCTTTAACCAGCAAACACAGGCTGCAGCTACCAAGCTTTACATGACATCATTAATGACATTGACAACATCTGCAGCTTGATGAGCCGCCGCGTTTAATCTTTTTACGCTTGTTTATTTTTCCATGGTACAGTTTAATTGAACAACTTGTAGAATTAAATGCATTACATTATAAACCATCTCACATGAGACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04322915_04335655.mRNA True 2750 mRNA 0.51 14 4322915 4335840

Neighbor

gene id symbol gene type direction distance location
CI01000018_04265169_04284528 DRD3 coding upstream 38295 4265169 ~ 4284620 (+)
CI01000018_04259548_04261044 NA coding upstream 61345 4259548 ~ 4261570 (+)
CI01000018_04243337_04245807 NA coding upstream 76925 4243024 ~ 4245990 (+)
CI01000018_04237268_04237554 NA coding upstream 85361 4237090 ~ 4237554 (+)
CI01000018_04234688_04235225 CST14A.1, CST14A.2 coding upstream 86900 4234688 ~ 4236015 (+)
CI01000018_04368179_04375192 NA coding downstream 32339 4368179 ~ 4375866 (+)
CI01000018_04378035_04382378 NAA50 coding downstream 42195 4378035 ~ 4383496 (+)
CI01000018_04384928_04393242 USF3 coding downstream 49088 4384928 ~ 4393358 (+)
CI01000018_04449934_04462663 NA coding downstream 113544 4449384 ~ 4462831 (+)
CI01000018_04474455_04481868 SHISA2 coding downstream 138615 4474455 ~ 4481914 (+)
G104522 NA non-coding upstream 19953 4302761 ~ 4302962 (+)
G104521 NA non-coding upstream 20481 4302199 ~ 4302434 (+)
G104519 NA non-coding upstream 29040 4293637 ~ 4293875 (+)
G104458 NA non-coding upstream 189880 4123943 ~ 4133035 (+)
G104452 NA non-coding upstream 212740 4109923 ~ 4110175 (+)
G104594 NA non-coding downstream 118264 4454104 ~ 4454319 (+)
G104532 NA non-coding downstream 147379 4483219 ~ 4484054 (+)
G104548 NA non-coding downstream 203330 4539170 ~ 4554081 (+)
CI01000018_04598617_04598799 NA non-coding downstream 262536 4598285 ~ 4598841 (+)
G104635 NA non-coding downstream 263175 4599015 ~ 4600102 (+)
G104258 NA other upstream 631396 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2337604 1924489 ~ 1985311 (+)
G102895 NA other upstream 2737253 1582913 ~ 1585662 (+)
G104670 NA other downstream 419961 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 880840 5216452 ~ 5222616 (+)
G106429 NA other downstream 2545771 6881611 ~ 6886325 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022909 ccdc191 coding NC_007135.7 CM002908.2 21092156 ~ 21120182 (+)