CI01000018_04243337_04245807


Basic Information

Item Value
gene id CI01000018_04243337_04245807
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4243024 ~ 4245990 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04243337_04245807.mRNA
CTATAAAAAAAGAAAGAATGACATGAAAAGATTGTGAAAGCTTGTTTGAAGAAGATCCCAATAACGGTTGTACTGTAACTGGAATTTTGGCAGGAACTATAGTTGCTAAGGGGAGTCTGAGACTCTTTGTAAAAATACATCTACAAATAAATTCTTAAATGGCAGCTCAAATGATAAGTTAAATGCTTATTCATATTAATTTCTTCATTTGTGGAACAAAAATATTTTGGACTTATAATCAGTGTGCAAATGTAACAGGAAACAACACATTTGTGTTGTATAAACATCATCATACAGCCAAAATGGGTTCACCATGGCAGCCTTAAAAGGTCAGTGGCGGAGAGGTGTGATGAACACAGGGAGCAGAAGACTGTGCAGCAAGCCTCAAGAAGGGGCATCTGCACCCCACCAGACCACAGAACGGGCTCAACGGCTTGGGTTTAAAGTACCGGGCTACCGCCCATCAGACTGGGATAGGAAGATGCTGGTGTGGTCCGGGCGATTCAAAGCCGCAGAGCAGATTCCCGAGTTTGTGTCTTTTGAGATGATTGATGCTGCCAGGAACAGAGTACGTGTGAAGGCCTGCTATGTCATGATGGCACTGACCATCGGGGCATGCCTCATTATGGTTATCACTGGCAAACAGGCTGCAGGTCGGCATGACAATCTGACCTCTCGTAACATGGAGAAGAAGGCTCGATGGAGAGAGGAAGCACAGAAGGAGAAGGAGGAGGCTGCTGCACTTGCAGATAAAGCCCAGTGATATGCGCACATTCAAACTCCCAAAGCCCATCATTCACCAACCAGCTTTTCAAATATCAAATGCCACACCCCATGGGAACTCTGGTGGAGGTGGTACAGATTTTCCTCCGCACAGACTTTTAGATTAGTGTATAAAATAATGATGTGAGATTCTGTGTGATGTTTGTATTTATATTCAGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04243337_04245807.mRNA True 946 mRNA 0.44 5 4243024 4245990

Neighbor

gene id symbol gene type direction distance location
CI01000018_04237268_04237554 NA coding upstream 5470 4237090 ~ 4237554 (+)
CI01000018_04234688_04235225 CST14A.1, CST14A.2 coding upstream 7009 4234688 ~ 4236015 (+)
CI01000018_04084765_04090616 SEC22C coding upstream 151863 4084564 ~ 4091161 (+)
CI01000018_04029960_04035673 KLHL40B, KLHL40 coding upstream 207306 4029770 ~ 4035718 (+)
CI01000018_04021370_04027014 HHATL, HHATLB coding upstream 215226 4020644 ~ 4027798 (+)
CI01000018_04259548_04261044 NA coding downstream 13558 4259548 ~ 4261570 (+)
CI01000018_04265169_04284528 DRD3 coding downstream 19179 4265169 ~ 4284620 (+)
CI01000018_04322915_04335655 NA coding downstream 76925 4322915 ~ 4335840 (+)
CI01000018_04368179_04375192 NA coding downstream 122189 4368179 ~ 4375866 (+)
CI01000018_04378035_04382378 NAA50 coding downstream 132045 4378035 ~ 4383496 (+)
G104458 NA non-coding upstream 109989 4123943 ~ 4133035 (+)
G104452 NA non-coding upstream 132849 4109923 ~ 4110175 (+)
G104420 NA non-coding upstream 214789 4027887 ~ 4028235 (+)
G104381 NA non-coding upstream 283278 3959531 ~ 3959746 (+)
G104291 NA non-coding upstream 340876 3879048 ~ 3902148 (+)
G104519 NA non-coding downstream 47647 4293637 ~ 4293875 (+)
G104521 NA non-coding downstream 56209 4302199 ~ 4302434 (+)
G104522 NA non-coding downstream 56771 4302761 ~ 4302962 (+)
G104594 NA non-coding downstream 208114 4454104 ~ 4454319 (+)
G104532 NA non-coding downstream 237229 4483219 ~ 4484054 (+)
G104258 NA other upstream 551505 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 2257713 1924489 ~ 1985311 (+)
G102895 NA other upstream 2657362 1582913 ~ 1585662 (+)
G104670 NA other downstream 509811 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 970690 5216452 ~ 5222616 (+)
G106429 NA other downstream 2635621 6881611 ~ 6886325 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022906 fam162a coding NC_007135.7 CM002908.2 20927135 ~ 20934666 (+)